RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 MTCH2Q9Y6C9 303 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 CEMIPQ8WUJ3 1361 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 KIAA0232Q92628 1395 aa4.36□□□□□ -1.71
TOPBP1-210ENST00000572787 IGHV2-70DA0A0C4DH43 119 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TCRBV9S1A1TA0A576 114 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 VPS37CA5D8V6 355 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 LILRA5A6NI73 299 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 EFCAB7A8K855 629 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 LAD1O00515 517 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 SLC9A3R1O14745 358 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 PPIHO43447 177 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 SSNA1O43805 119 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 ALOX12BO75342 701 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 RAB36O95755 333 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 ATP1B1P05026 303 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TFAP2AP05549 437 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 RNH1P13489 461 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 CELP19835 753 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 EDNRAP25101 427 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TIMP3P35625 211 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 XCR1P46094 333 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 YAP1P46937 504 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 RIDAP52758 137 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM3AP98173 230 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 HSF1Q00613 529 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 ELAVL2Q12926 359 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 ASAH1Q13510 395 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 AQP6Q13520 282 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 KRR1Q13601 381 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 RBM39Q14498 530 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TAF1AQ15573 450 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 DUSP7Q16829 419 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 FRMPD2BQ6IN97 320 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 LCLAT1Q6UWP7 414 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM131AQ6UXB0 335 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 RIMKLAQ8IXN7 391 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 ABHD12Q8N2K0 398 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 MREGQ8N565 214 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 OR7A2PQ8NGA2 310 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 OR4F17Q8NGA8 305 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 OR51D1Q8NGF3 324 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 OR5L1Q8NGL2 311 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 OR4F5Q8NH21 305 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 SYNPRQ8TBG9 265 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 MCOLN3Q8TDD5 553 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TMEM255BQ8WV15 326 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 DNASE2BQ8WZ79 361 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 HAS1Q92839 578 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TLCD1Q96CP7 247 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 C4orf45Q96LM5 186 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 OR4F4Q96R69 305 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 RNF2Q99496 336 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 CHRNA10Q9GZZ6 450 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 A4GALTQ9NPC4 353 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 HRASLS2Q9NWW9 162 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TESQ9UGI8 421 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 SMPXQ9UHP9 88 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 ENOPH1Q9UHY7 261 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 LSM7Q9UK45 103 aaKnown RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 ING1Q9UK53 422 aaPredicted RBP4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 RAB26Q9ULW5 256 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 TNRQ92752 1358 aa4.35□□□□□ -1.71
TOPBP1-210ENST00000572787 A0A1B0GU03 582 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM231BA6NCW3 169 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 DFFAO00273 331 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 CCRL2O00421 344 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 PRRG2O14669 202 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 FGF16O43320 207 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 MAGEC1O60732 1142 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TOM1O60784 492 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 SHOX2O60902 331 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TRAPPC6AO75865 159 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 OXSR1O95747 527 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 IFNA16P05015 189 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 SERPINB2P05120 415 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 GUSBP08236 651 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 FAM157CP0CG43 387 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 CHRNB2P17787 502 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 GM2AP17900 193 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 FUT3P21217 361 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 ATP6V1B2P21281 511 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 LOXP28300 417 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 GNRHRP30968 328 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 SSTR5P35346 364 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 RFC3P40938 356 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 PRKXP51817 358 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 XGP55808 180 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 RHOAP61586 193 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 RPL19P84098 196 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TFAMQ00059 246 aaKnown RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 IL18R1Q13478 541 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 EIF4EBP2Q13542 120 aaPredicted RBP4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 ITPK1Q13572 414 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 RAB31Q13636 194 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 POU6F1Q14863 301 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 DCST2Q5T1A1 773 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 ASPHD1Q5U4P2 390 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TRIQKQ629K1 86 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 TRNP1Q6NT89 227 aa4.34□□□□□ -1.71
TOPBP1-210ENST00000572787 CD200R1LQ6Q8B3 271 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms