RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 HIST3H3Q16695 136 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 C6orf52Q5T4I8 152 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 CARD17Q5XLA6 110 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 DPPA2Q7Z7J5 298 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 CARM1Q86X55 608 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 C10orf82Q8WW14 230 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 HTRA1Q92743 480 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 DOK1Q99704 481 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 MALRD1Q5VYJ5 2156 aa14.78□□□□□ -0.04
MAP1LC3B-208ENST00000570189 TMEM129A0AVI4 362 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 A8MV72 311 aaPredicted RBP14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 C11orf98E9PRG8 122 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RNF13O43567 381 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 GPRIN2O60269 458 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HLA-HP01893 362 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PGA4P0DJD7 388 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PGA3P0DJD8 388 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 B4GALT1P15291 398 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 USF1P22415 310 aaPredicted RBP14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 THBS4P35443 961 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ZNF133P52736 654 aaPredicted RBP14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NPRL3Q12980 569 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LRFN4Q6PJG9 635 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HDDC2Q7Z4H3 204 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ARPINQ7Z6K5 226 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ZNF566Q969W8 418 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MRPL13Q9BYD1 178 aaKnown RBP14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RAB1BQ9H0U4 201 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SH3GLB1Q9Y371 365 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CAPN7Q9Y6W3 813 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ATRQ13535 2644 aa14.77□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RTTNQ86VV8 2226 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 KIAA1324LA8MWY0 1029 aaPredicted RBP14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SEC14L2O76054 403 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HIST1H2ABP04908 130 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 GIFP27352 417 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 KDELR2P33947 212 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CAPZA2P47755 286 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 DAG1Q14118 895 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HIST3H2AQ7L7L0 130 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NANOGNBQ7Z5D8 188 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LRRC17Q8N6Y2 441 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ZNF540Q8NDQ6 660 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 OR2T12Q8NG77 320 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RP9Q8TA86 221 aaKnown RBP14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NEU4Q8WWR8 484 aaPredicted RBP14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 HIST1H2ACQ93077 130 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PIMREGQ9BSJ6 248 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MED4Q9NPJ6 270 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TMEM38BQ9NVV0 291 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 STX18Q9P2W9 335 aaKnown RBP14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RIMS3Q9UJD0 308 aa14.76□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FBN1P35555 2871 aaKnown RBP14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 hCG_2039718K7EN88 272 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 DHHO43323 396 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 OR7A10O76100 309 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 BCL10O95999 233 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 IGHG1P01857 330 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 OR8G3PP0DMU2 310 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CD79AP11912 226 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 GLRXP35754 106 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NR4A2P43354 598 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 UGT2B15P54855 530 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TAS2R41P59536 307 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RPS23P62266 143 aaKnown RBP14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RAB1AP62820 205 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SELENOWP63302 87 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 GUCY1A3Q02108 690 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RPL18Q07020 188 aaKnown RBP14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SNTB2Q13425 540 aaKnown RBP14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 FXNQ16595 210 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CYBRD1Q53TN4 286 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 NKAIN4Q8IVV8 208 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MICU2Q8IYU8 434 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SLC22A24Q8N4F4 322 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TMEM255BQ8WV15 326 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TMEM239Q8WW34 195 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 MRPL24Q96A35 216 aaKnown RBP14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 YAE1D1Q9NRH1 226 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CMAHPQ9Y471 501 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SPEF1Q9Y4P9 236 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CUBNO60494 3623 aa14.75□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LOC100653049A0A140TA62 436 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ELOVL7A1L3X0 281 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 KPNA4O00629 521 aaPredicted RBP14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SERPINI2O75830 405 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 KRT34O76011 436 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LY6HO94772 140 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 RAB36O95755 333 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 SERPINA5P05154 406 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 ERCC1P07992 297 aaPredicted RBP14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 IGFBP1P08833 259 aaPredicted RBP14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 IGHV4-31P0DP07 118 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 GIPRP48546 466 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 DAP3P51398 398 aaKnown RBP14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 LSM11P83369 360 aaKnown RBP eCLIP14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 PIN1Q13526 163 aaPredicted RBP14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 TAF11Q15544 211 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 C10orf128Q5T292 105 aa14.74□□□□□ -0.05
MAP1LC3B-208ENST00000570189 CYB5R2Q6BCY4 276 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms