RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 SIRPB2Q5JXA9 342 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SPANXN2Q5MJ10 180 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 DDI2Q5TDH0 399 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 AGAP7PQ5VUJ5 663 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 AADACL4Q5VUY2 407 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MLIPQ5VWP3 458 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF324BQ6AW86 544 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 DMKNQ6E0U4 476 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 LEG1Q6P5S2 330 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SPESP1Q6UW49 350 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF562Q6V9R5 426 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF841Q6ZN19 808 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 Q6ZRG5 221 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 KCTD8Q6ZWB6 473 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 H2AFVQ71UI9 128 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 NLRP9Q7RTR0 991 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 GLT6D1Q7Z4J2 308 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SLC38A6Q8IZM9 456 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 KIRREL3Q8IZU9 778 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 TMEM123Q8N131 208 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF321PQ8N8H1 164 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF441Q8N8Z8 693 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SPATA4Q8NEY3 305 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 BLOC1S5Q8TDH9 187 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 DNAJA4Q8WW22 397 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 TMED6Q8WW62 240 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ASB5Q8WWX0 329 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ZG16BQ96DA0 208 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 C11orf24Q96F05 449 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SH3YL1Q96HL8 342 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 AGAP4Q96P64 663 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 VAT1Q99536 393 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 RHNO1Q9BSD3 238 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 CHRDL1Q9BU40 450 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SF3B5Q9BWJ5 86 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 ROPN1BQ9BZX4 212 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 SLC7A5P2Q9GIP4 190 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 OR52A5Q9H2C5 316 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 RHOJQ9H4E5 214 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 EHD1Q9H4M9 534 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 FNDC4Q9H6D8 234 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 WDR54Q9H977 334 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 IL1RL2Q9HB29 575 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MRM3Q9HC36 420 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 NEK6Q9HC98 313 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 RAB18Q9NP72 206 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MED17Q9NVC6 651 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 C1orf123Q9NWV4 160 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 NXT1Q9UKK6 140 aaKnown RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 PIGLQ9Y2B2 252 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 IFT52Q9Y366 437 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 HEY1Q9Y5J3 304 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 KLF2Q9Y5W3 355 aaPredicted RBP2.75□□□□□ -1.97
CNOT1-221ENST00000569924 NF1P21359 2839 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 MYO7BQ6PIF6 2116 aa2.75□□□□□ -1.97
CNOT1-221ENST00000569924 TACC2O95359 2948 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 IGLV3-16A0A075B6K0 115 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TRBV5-4A0A0C4DH59 114 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 A0A0J9YY10 115 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 LINC00854A0A1B0GVQ3 168 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 FBLL1A6NHQ2 334 aaKnown RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 HACD1B0YJ81 288 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 PRSS44E7EML9 344 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 HCRTR1O43613 425 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TIMM8AO60220 97 aaPredicted RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TPST2O60704 377 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 ZG16O60844 167 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 SRP72O76094 671 aaKnown RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TOXO94900 526 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 AP2A2O94973 939 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 NXPH2O95156 264 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 AP2A1O95782 977 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 PAHP00439 452 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 OPN1LWP04000 364 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 S100A9P06702 114 aaKnown RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TPM1P09493 284 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 FAM157CP0CG43 387 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TROVE2P10155 538 aaKnown RBP eCLIP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 ATP1B2P14415 290 aaPredicted RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 PVRP15151 417 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 UGT2B7P16662 529 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 AADACP22760 399 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 PTBP1P26599 531 aaKnown RBP eCLIP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 LAP3P28838 519 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 SHMT2P34897 504 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 CDKN2BP42772 138 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 SLC1A1P43005 524 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 MAGEA8P43361 318 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 OR3A2P47893 321 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 HOXA1P49639 335 aaPredicted RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 ZNF140P52738 457 aaPredicted RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 BTG1P62324 171 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TUBA1BP68363 451 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 OTUD4Q01804 1114 aaKnown RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 ZP4Q12836 540 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 RIGQ13278 110 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 DOC2AQ14183 400 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 TFDP2Q14188 446 aa2.74□□□□□ -1.97
CNOT1-221ENST00000569924 GANABQ14697 944 aaKnown RBP2.74□□□□□ -1.97
CNOT1-221ENST00000569924 ZIC1Q15915 447 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms