RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 AK4P27144 223 aaPredicted RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 MRPL19P49406 292 aaKnown RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 CSNK1G2P78368 415 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 TAB1Q15750 504 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 PLAC9Q5JTB6 97 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OR2A2Q6IF42 318 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 MED27Q6P2C8 311 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 TEX38Q6PEX7 206 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 PHF10Q8WUB8 498 aaKnown RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 RND1Q92730 232 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 LHX4Q969G2 390 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 PNPLA2Q96AD5 504 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SPSB1Q96BD6 273 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OTULINQ96BN8 352 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 TMEM80Q96HE8 168 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 GPR22Q99680 433 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CPNE1Q99829 537 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 TRMOQ9BU70 441 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SLA2Q9H6Q3 261 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OR51B4Q9Y5P0 310 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 A0A1B0GTL3 188 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CCDC182A6NF36 153 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 M0QZ24 198 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 OIP5O43482 229 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 ZMPSTE24O75844 475 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 MELTFP08582 738 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SMIM6P0DI80 62 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CRYBA4P53673 196 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SLC34A1Q06495 639 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 BTN1A1Q13410 526 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 XKR7Q5GH72 579 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SIGLEC15Q6ZMC9 328 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 GPRIN3Q6ZVF9 776 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 WDFY1Q8IWB7 410 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 FAM83FQ8NEG4 500 aaPredicted RBP6.06□□□□□ -1.44
SMG1-217ENST00000569764 ST8SIA1Q92185 356 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 EXTL1Q92935 676 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 CDKN2AIPNLQ96HQ2 116 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 SLITRK2Q9H156 845 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 TMEM74BQ9NUR3 256 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 BTNL2Q9UIR0 455 aa6.06□□□□□ -1.44
SMG1-217ENST00000569764 C2orf16Q68DN1 1984 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 ELOA3CA0A087WX78 387 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 A0A087X1B8 175 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 ELOA3DA6NLF2 546 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 RFXANKO14593 260 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 HPP00738 406 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 IDH2P48735 452 aaKnown RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 SSR4P51571 173 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 CDH12P55289 794 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 ABCE1P61221 599 aaKnown RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 CD300CQ08708 224 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 GRK1Q15835 563 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 CHRFAM7AQ494W8 412 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 IZUMO2Q6UXV1 221 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 RPS19BP1Q86WX3 136 aaKnown RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 LACC1Q8IV20 430 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 CMTM7Q96FZ5 175 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 MRGPRX3Q96LB0 322 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 SLC30A3Q99726 388 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 ANGPTL4Q9BY76 406 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 CPNE5Q9HCH3 593 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 USE1Q9NZ43 259 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 NKX1-2Q9UD57 310 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 ZDHHC2Q9UIJ5 367 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 GNG8Q9UK08 70 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 FBXO5Q9UKT4 447 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 MOKQ9UQ07 419 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 B3GNT3Q9Y2A9 372 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 DOCK9Q9BZ29 2069 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 M0QZK8 103 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 PPP6CO00743 305 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 WISP3O95389 354 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 FPR3P25089 353 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 ACADLP28330 430 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 CCR7P32248 378 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 UQCRFS1P47985 274 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 AQP5P55064 265 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 TGFBR3Q03167 851 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 MESP2Q0VG99 397 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 RBM48Q5RL73 367 aaKnown RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 CREB3L2Q70SY1 520 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 MRPL21Q7Z2W9 205 aaKnown RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 C2CD4AQ8NCU7 369 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 OR1L4Q8NGR5 311 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 OR14A16Q8NHC5 309 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 GLYATL2Q8WU03 294 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 COQ10AQ96MF6 247 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 JSRP1Q96MG2 331 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 B3GAT2Q9NPZ5 323 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 NLE1Q9NVX2 485 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 COA4Q9NYJ1 87 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 EMC9Q9Y3B6 208 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 RBM7Q9Y580 266 aaKnown RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 KLF2Q9Y5W3 355 aaPredicted RBP6.05□□□□□ -1.44
SMG1-217ENST00000569764 FREM2Q5SZK8 3169 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 TRBV7-9A0A0J9YWB2 115 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 HSPB2A8KAH6 182 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 LOC110117498-PIK3R3F6TDL0 507 aa6.05□□□□□ -1.44
SMG1-217ENST00000569764 ACOX3O15254 700 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms