RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CORINQ9Y5Q5 1042 aa11.94□□□□□ -0.5
GTF3C1-211ENST00000569653 LOC390937A0A1W2PQ73 354 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 C11orf98E9PRG8 122 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 NDUFS8O00217 210 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 CHP2O43745 196 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 LMX1BO60663 402 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 FMO6PO60774 539 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 SHOX2O60902 331 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 LILRA1O75019 489 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 STAMBPO95630 424 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 IFNGR1P15260 489 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 NR4A1P22736 598 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 GIFP27352 417 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 PCGF2P35227 344 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 BIDP55957 195 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 TRIP10Q15642 601 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF74Q16587 644 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 ENTPD8Q5MY95 495 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 SWT1Q5T5J6 900 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 NANOGP8Q6NSW7 305 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF613Q6PF04 617 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 PXKQ7Z7A4 578 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 PATL1Q86TB9 770 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 LRP11Q86VZ4 500 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 OR10A6Q8NH74 314 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 VANGL1Q8TAA9 524 aaPredicted RBP11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 TMEM54Q969K7 222 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 LRR1Q96L50 414 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 PRSS27Q9BQR3 290 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF426Q9BUY5 554 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 ASPNQ9BXN1 380 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 NANOGQ9H9S0 305 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 ARMCX1Q9P291 453 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 NOX1Q9Y5S8 564 aa11.93□□□□□ -0.5
GTF3C1-211ENST00000569653 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 LOC100653049A0A140TA62 436 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 LOC100289279A0A1B0GTE1 492 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 SH3PXD2BA1X283 911 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 KPNA4O00629 521 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 AKAP8O43823 692 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 KRT34O76011 436 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 CH25HO95992 272 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 CD79AP11912 226 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 APEHP13798 732 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 DAOP14920 347 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 ZNF23P17027 643 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 TNFRSF1BP20333 461 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 FUT4P22083 530 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 AHCYP23526 432 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 PAX7P23759 505 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 CAPZA2P47755 286 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 GIPRP48546 466 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 GZMKP49863 264 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 RUNX1T1Q06455 604 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 RIN1Q13671 783 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 DAG1Q14118 895 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 MELKQ14680 651 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 FXNQ16595 210 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 VMACQ2NL98 169 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 FAM120AOSQ5T036 256 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 LRFN4Q6PJG9 635 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 CPLX4Q7Z7G2 160 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 RANBP3LQ86VV4 465 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 CARM1Q86X55 608 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 SKA3Q8IX90 412 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 PAQR4Q8N4S7 273 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 C10orf53Q8N6V4 93 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 OR5J2Q8NH18 312 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 RP9Q8TA86 221 aaKnown RBP11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 ADAMTS16Q8TE57 1224 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 EPYCQ99645 322 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 FOXB1Q99853 325 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 ECSITQ9BQ95 431 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 BEX2Q9BXY8 128 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 ULBP2Q9BZM5 246 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 TPK1Q9H3S4 243 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 MEPEQ9NQ76 525 aaPredicted RBP11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 SELENONQ9NZV5 590 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 FZR1Q9UM11 496 aa11.92□□□□□ -0.5
GTF3C1-211ENST00000569653 NBEAL1Q6ZS30 2694 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 ADRA2AP08913 450 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 ADORA3P0DMS8 318 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 PTDSS1P48651 473 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 RAB39AQ14964 217 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 MAD2L1BPQ15013 274 aaPredicted RBP11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 GSG1Q2KHT4 349 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 RABL3Q5HYI8 236 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 ERICH5Q6P6B1 374 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 SLC35D2Q76EJ3 337 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 ARPINQ7Z6K5 226 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 CALHM3Q86XJ0 350 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 OR6N1Q8NGY5 312 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 SLC26A7Q8TE54 656 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 RASSF5Q8WWW0 418 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 MRPL24Q96A35 216 aaKnown RBP11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 RCN3Q96D15 328 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 CCT8L2Q96SF2 557 aa11.91□□□□□ -0.5
GTF3C1-211ENST00000569653 PCDHAC1Q9H158 963 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms