RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 RASSF1Q9NS23 344 aa11.09□□□□□ -0.63
EDC3-217ENST00000569606 VSX1Q9NZR4 365 aaPredicted RBP11.09□□□□□ -0.63
EDC3-217ENST00000569606 AASSQ9UDR5 926 aa11.09□□□□□ -0.63
EDC3-217ENST00000569606 NOSIPQ9Y314 301 aaKnown RBP11.09□□□□□ -0.63
EDC3-217ENST00000569606 NBEAQ8NFP9 2946 aa11.09□□□□□ -0.63
EDC3-217ENST00000569606 SLC22A23A1A5C7 686 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 PRSS37A4D1T9 235 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 FAM183AA6NL82 134 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 MPZL2O60487 215 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 WBP4O75554 376 aaKnown RBP11.08□□□□□ -0.64
EDC3-217ENST00000569606 IGHG1P01857 330 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 GLI4P10075 376 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 TIMP3P35625 211 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 SELENOPP49908 381 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 DBPQ10586 325 aaPredicted RBP11.08□□□□□ -0.64
EDC3-217ENST00000569606 TMEM201Q5SNT2 666 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 CARD17Q5XLA6 110 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 PLBD1Q6P4A8 553 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
EDC3-217ENST00000569606 NUFIP2Q7Z417 695 aaKnown RBP11.08□□□□□ -0.64
EDC3-217ENST00000569606 BCDIN3DQ7Z5W3 292 aaKnown RBP11.08□□□□□ -0.64
EDC3-217ENST00000569606 CPOQ8IVL8 374 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 GCNT2Q8N0V5 402 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 MARVELD2Q8N4S9 558 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 ZNF566Q969W8 418 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 NMD3Q96D46 503 aaKnown RBP11.08□□□□□ -0.64
EDC3-217ENST00000569606 LRR1Q96L50 414 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 TTYH2Q9BSA4 534 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 ALG12Q9BV10 488 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 HCAR1Q9BXC0 346 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 NMNAT2Q9BZQ4 307 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 MED20Q9H944 212 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 UBAP1Q9NZ09 502 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 SH3BGRL2Q9UJC5 107 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 PCDHGB5Q9Y5G0 923 aa11.08□□□□□ -0.64
EDC3-217ENST00000569606 CENPBD1B2RD01 187 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 PRR23D1E9PI22 279 aaPredicted RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 AHCYL1O43865 530 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 SLC43A1O75387 559 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 RENP00797 406 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 PRB1P04280 392 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 PRR23D2P0DMB1 279 aaPredicted RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 PAICSP22234 425 aaKnown RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 EDNRAP25101 427 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 CEACAM8P31997 349 aaPredicted RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 CA7P43166 264 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 CLRN1P58418 232 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 TEKQ02763 1124 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 CDK5R2Q13319 367 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 MRPL49Q13405 166 aaKnown RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 MED21Q13503 144 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 OCLNQ16625 522 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 HIST3H3Q16695 136 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 SLC25A30Q5SVS4 291 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 AADACL4Q5VUY2 407 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 LAIR2Q6ISS4 152 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 FAM214BQ7L5A3 538 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 C20orf196Q8IYI0 205 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 SYT14Q8NB59 555 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 NAXEQ8NCW5 288 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 OR9Q1Q8NGQ5 310 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 CNIH3Q8TBE1 160 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 PTP4A1Q93096 173 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 INTS12Q96CB8 462 aaKnown RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 ZFP3Q96NJ6 502 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 SYT4Q9H2B2 425 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 RPRD1BQ9NQG5 326 aaKnown RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 PARPBPQ9NWS1 579 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 DNAJC27Q9NZQ0 273 aa11.07□□□□□ -0.64
EDC3-217ENST00000569606 FOXD3Q9UJU5 478 aaPredicted RBP11.07□□□□□ -0.64
EDC3-217ENST00000569606 ALPK2Q86TB3 2170 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 TRGV8A0A0C4DH27 118 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 B8ZZF3 427 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 E9PLN8 166 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 DCTN6O00399 190 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 MRPL33O75394 65 aaKnown RBP11.06□□□□□ -0.64
EDC3-217ENST00000569606 C1QL1O75973 258 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 IL2RAP01589 272 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 CRHP06850 196 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 STSP08842 583 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 TMIGD3P0DMS9 266 aaPredicted RBP11.06□□□□□ -0.64
EDC3-217ENST00000569606 CLUP10909 449 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 SLC2A5P22732 501 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 KIR2DL2P43627 348 aaPredicted RBP11.06□□□□□ -0.64
EDC3-217ENST00000569606 CSNK1A1P48729 337 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 ZNF133P52736 654 aaPredicted RBP11.06□□□□□ -0.64
EDC3-217ENST00000569606 SLC25A1P53007 311 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 PER3P56645 1201 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 SIRPAP78324 504 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 TLE1Q04724 770 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 FMODQ06828 376 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 LGALS3BPQ08380 585 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 FOXF2Q12947 444 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 PHYHD1Q5SRE7 291 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 RIPPLY2Q5TAB7 128 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 TSPO2Q5TGU0 170 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 MEDAGQ5VYS4 303 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 NXNL2Q5VZ03 156 aa11.06□□□□□ -0.64
EDC3-217ENST00000569606 KRT80Q6KB66 452 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms