RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 FAM162AQ96A26 154 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 CDRT15Q96T59 188 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 PIP5K1AQ99755 562 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 FOXC2Q99958 501 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 FNDC11Q9BVV2 318 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 AMBRA1Q9C0C7 1298 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 B3GAT2Q9NPZ5 323 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 SLC7A10Q9NS82 523 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 B3GAT1Q9P2W7 334 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF229Q9UJW7 825 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 MGAT4BQ9UQ53 548 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 MED31Q9Y3C7 131 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 FAM32AQ9Y421 112 aaKnown RBP8.07□□□□□ -1.12
CAPN3-219ENST00000569136 ARHGAP21Q5T5U3 1957 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 HCFC1P51610 2035 aa8.07□□□□□ -1.12
CAPN3-219ENST00000569136 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 SHOX2O60902 331 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ENTPD5O75356 428 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF682O95780 498 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 CH25HO95992 272 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 THY1P04216 161 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ADORA3P0DMS8 318 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ITGA2P17301 1181 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 FUT1P19526 365 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 EDNRAP25101 427 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 PTAFRP25105 342 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 OR1E2P47887 323 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 IST1P53990 364 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 TESK1Q15569 626 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 TSC22D1Q15714 1073 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 STK11Q15831 433 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 GABRA6Q16445 453 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ANKDD1AQ495B1 522 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 NCMAPQ5T1S8 102 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 NIPAL3Q6P499 406 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 KLHL24Q6TFL4 600 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 TMEM108Q6UXF1 575 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 PAMR1Q6UXH9 720 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 NHLRC1Q6VVB1 395 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 SPNS3Q6ZMD2 512 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 CDK20Q8IZL9 346 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 GPR137CQ8N3F9 429 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 MAGEE2Q8TD90 523 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 TMEM239Q8WW34 195 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 SGTBQ96EQ0 304 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ADAD1Q96M93 576 aaKnown RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 MOGAT1Q96PD6 335 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 PRSS27Q9BQR3 290 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 TMEM204Q9BSN7 226 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ANKRD19PQ9H560 264 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 DCAF13Q9NV06 445 aaKnown RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ARL8BQ9NVJ2 186 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 BEX4Q9NWD9 120 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 STX18Q9P2W9 335 aaKnown RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 ITGB1BP2Q9UKP3 347 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 USP22Q9UPT9 525 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 SAMD4AQ9UPU9 718 aaKnown RBP8.06□□□□□ -1.12
CAPN3-219ENST00000569136 AMDHD2Q9Y303 409 aa8.06□□□□□ -1.12
CAPN3-219ENST00000569136 KIAA1549Q9HCM3 1950 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 ARHGEF9O43307 516 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 MGRN1O60291 552 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 RAD51DO75771 328 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 SERPINA1P01009 418 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 ITGA5P08648 1049 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 ASAH2BP0C7U1 165 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 RHCEP18577 417 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 LOXP28300 417 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-219ENST00000569136 SELENOPP49908 381 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 SMIM11AP58511 58 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 MXRA7P84157 204 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 TRAM2Q15035 370 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 ANKRD16Q6P6B7 361 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 WDR88Q6ZMY6 472 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 RRM2BQ7LG56 351 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 HDDC2Q7Z4H3 204 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 C20orf196Q8IYI0 205 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 FITM2Q8N6M3 262 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF611Q8N823 705 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 OR6X1Q8NH79 312 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 BCL2L2Q92843 193 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-219ENST00000569136 PRRC1Q96M27 445 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 CXXC4Q9H2H0 198 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 SLC17A5Q9NRA2 495 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 CCM2LQ9NUG4 571 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-219ENST00000569136 TAS2R5Q9NYW4 299 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 CD300AQ9UGN4 299 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 MAGEL2Q9UJ55 1249 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 A4GNTQ9UNA3 340 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 PLEKHA6Q9Y2H5 1048 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 RNF115Q9Y4L5 304 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 SLC25A15Q9Y619 301 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 ENPP4Q9Y6X5 453 aa8.05□□□□□ -1.12
CAPN3-219ENST00000569136 MTORP42345 2549 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 PRRC2AP48634 2157 aaKnown RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 PDZD2O15018 2839 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 MAP1AP78559 2803 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 A0A1W2PRG6 482 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 DPRXA6NFQ7 191 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 CENPBD1B2RD01 187 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 BLOC1S5-TXNDC5H3BN57 136 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms