RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 SSX4O60224 188 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 PDE5AO76074 875 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 BCL10O95999 233 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 HLA-HP01893 362 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 IFNW1P05000 195 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 B4GALT1P15291 398 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 SERPINF1P36955 418 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 CAPZA2P47755 286 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 PSME3P61289 254 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 MELKQ14680 651 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 GSG1Q2KHT4 349 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 LRFN4Q6PJG9 635 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 PIWIL3Q7Z3Z3 882 aaKnown RBP17.61■□□□□ 0.41
CLK3-225ENST00000569063 GEMIN6Q8WXD5 167 aaKnown RBP17.61■□□□□ 0.41
CLK3-225ENST00000569063 ZNF75AQ96N20 296 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 REG4Q9BYZ8 158 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 DENND2DQ9H6A0 471 aaPredicted RBP17.61■□□□□ 0.41
CLK3-225ENST00000569063 ZNF224Q9NZL3 707 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 SNX13Q9Y5W8 968 aa17.61■□□□□ 0.41
CLK3-225ENST00000569063 PLCE1Q9P212 2302 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 CENPBD1B2RD01 187 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 RNF223E7ERA6 249 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 ZNF682O95780 498 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 SERPINA1P01009 418 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 F13BP05160 661 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 CD79AP11912 226 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 AQP2P41181 271 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 NUDT6P53370 316 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 HGFACQ04756 655 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 NPRL3Q12980 569 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 ADIPOQQ15848 244 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 HIST3H3Q16695 136 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 KRTAP21-3Q3LHN1 58 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 IFI44LQ53G44 452 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 OFCC1Q8IZS5 231 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 NANOS1Q8WY41 292 aaKnown RBP17.6■□□□□ 0.41
CLK3-225ENST00000569063 SEPHS2Q99611 448 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 KCTD14Q9BQ13 255 aaPredicted RBP17.6■□□□□ 0.41
CLK3-225ENST00000569063 FNDC11Q9BVV2 318 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 MRPL13Q9BYD1 178 aaKnown RBP17.6■□□□□ 0.41
CLK3-225ENST00000569063 INIPQ9NRY2 104 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 ALPK2Q86TB3 2170 aa17.6■□□□□ 0.41
CLK3-225ENST00000569063 IGHV2OR16-5A0A0B4J2B6 119 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 FFAR1O14842 300 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 IGHG1P01857 330 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 FUT4P22083 530 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 YAP1P46937 504 aaKnown RBP17.59■□□□□ 0.41
CLK3-225ENST00000569063 DAP3P51398 398 aaKnown RBP17.59■□□□□ 0.41
CLK3-225ENST00000569063 DSCR9P59020 149 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 EFNB3Q15768 340 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 FKBP9P1Q75LS8 142 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 HDDC2Q7Z4H3 204 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 OR10H5Q8NGA6 315 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 BPIFA2Q96DR5 249 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 FBXO17Q96EF6 278 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 ZNF442Q9H7R0 627 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 NOX3Q9HBY0 568 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 SPAG4Q9NPE6 437 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 MAN2C1Q9NTJ4 1040 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 HIF3AQ9Y2N7 669 aa17.59■□□□□ 0.41
CLK3-225ENST00000569063 NIPBLQ6KC79 2804 aaeCLIP17.58■□□□□ 0.41
CLK3-225ENST00000569063 NPIPB13A6NJU9 1138 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 NPIPB4C9JG80 1138 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 J3KTA2 159 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 DHHO43323 396 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 PIP5K1CO60331 668 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 ENTPD5O75356 428 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 UBL3O95164 117 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 QDPRP09417 244 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 OR4A8P0C604 315 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 ZNF14P17017 642 aaPredicted RBP17.58■□□□□ 0.4
CLK3-225ENST00000569063 EFNA4P52798 201 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 GYS2P54840 703 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 SNRPD2P62316 118 aaKnown RBP17.58■□□□□ 0.4
CLK3-225ENST00000569063 GNGT1P63211 74 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 LSM11P83369 360 aaKnown RBP eCLIP17.58■□□□□ 0.4
CLK3-225ENST00000569063 RUNX1T1Q06455 604 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 PIGFQ07326 219 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 LAPTM4AQ15012 233 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 TRAM2Q15035 370 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 SKA3Q8IX90 412 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 RNF113BQ8IZP6 322 aaKnown RBP17.58■□□□□ 0.4
CLK3-225ENST00000569063 SLC22A24Q8N4F4 322 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 MOSPD2Q8NHP6 518 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 ASB10Q8WXI3 467 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 HSH2DQ96JZ2 352 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 RHNO1Q9BSD3 238 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 TMEM38BQ9NVV0 291 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 RHCGQ9UBD6 479 aa17.58■□□□□ 0.4
CLK3-225ENST00000569063 B9A039 149 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 MCIDASD6RGH6 385 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 PRSS23O95084 383 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 F12P00748 615 aaPredicted RBP17.57■□□□□ 0.4
CLK3-225ENST00000569063 OR8G3PP0DMU2 310 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 IFI30P13284 250 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 ACADSP16219 412 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 NCK1P16333 377 aa17.57■□□□□ 0.4
CLK3-225ENST00000569063 PTDSS1P48651 473 aaKnown RBP17.57■□□□□ 0.4
CLK3-225ENST00000569063 ZNF133P52736 654 aaPredicted RBP17.57■□□□□ 0.4
CLK3-225ENST00000569063 CLRN1P58418 232 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms