RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 WDFY1Q8IWB7 410 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 DEFB108BQ8NET1 73 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 OR6S1Q8NH40 331 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 C11orf40Q8WZ69 217 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 SLC41A3Q96GZ6 507 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 TSPAN32Q96QS1 320 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 EMC6Q9BV81 110 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 SAP30LQ9HAJ7 183 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 CACYBPQ9HB71 228 aaKnown RBP10.59□□□□□ -0.71
SNX29-207ENST00000568949 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.59□□□□□ -0.71
SNX29-207ENST00000568949 IFT52Q9Y366 437 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 MMP24Q9Y5R2 645 aa10.59□□□□□ -0.71
SNX29-207ENST00000568949 V9GYY5 206 aaPredicted RBP10.59□□□□□ -0.71
SNX29-207ENST00000568949 TRAV36DV7A0A075B6V5 113 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 ZNF726A6NNF4 738 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 RGS16O15492 202 aaPredicted RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 TPD52L2O43399 206 aaKnown RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 ENTPD5O75356 428 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 HPRP00739 348 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 FAM157BP0CG42 384 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 HLA-DOBP13765 273 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 NQO1P15559 274 aaKnown RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 CDKN2CP42773 168 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 SLC3A1Q07837 685 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 RBBP4Q09028 425 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 KRT71Q3SY84 523 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 PDCD4Q53EL6 469 aaKnown RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 SKA3Q8IX90 412 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 SCAIQ8N9R8 606 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 SLC30A7Q8NEW0 376 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 OR6N1Q8NGY5 312 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 TCP10LQ8TDR4 215 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 ST7LQ8TDW4 575 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 SLC38A5Q8WUX1 472 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 ELMOD3Q96FG2 381 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 TXNDC15Q96J42 360 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 PPP1R36Q96LQ0 422 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 ZNF48Q96MX3 618 aaPredicted RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 C1orf198Q9H425 327 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 TCF7L2Q9NQB0 619 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 ARGLU1Q9NWB6 273 aaPredicted RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 KLHL14Q9P2G3 628 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 RPS6KB2Q9UBS0 482 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 LEF1Q9UJU2 399 aaPredicted RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 PURGQ9UJV8 347 aaKnown RBP10.58□□□□□ -0.72
SNX29-207ENST00000568949 CACNG2Q9Y698 323 aa10.58□□□□□ -0.72
SNX29-207ENST00000568949 IGKV1D-42A0A075B6H8 117 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 A0A087WUJ7 227 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 A0A0G2JPF8 293 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 HNRNPCL2B2RXH8 293 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 HNRNPCL3B7ZW38 293 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 HNRNPCL1O60812 293 aaKnown RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 SNAP29O95721 258 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 BCHEP06276 602 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 BPGMP07738 259 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 PATE4P0C8F1 98 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 HNRNPCL4P0DMR1 293 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 LBPP18428 481 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 MVDP53602 400 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 HOXC5Q00444 222 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 SLC9A3R2Q15599 337 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 TSTQ16762 297 aaKnown RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 KLF17Q5JT82 389 aaPredicted RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 KIRREL3Q8IZU9 778 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 BCL6BQ8N143 479 aaPredicted RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 PAQR4Q8N4S7 273 aaPredicted RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 LSMEM1Q8N8F7 131 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 GLB1L3Q8NCI6 653 aaPredicted RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 FGFBP3Q8TAT2 258 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 OR52E6Q96RD3 313 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 BCL2L14Q9BZR8 327 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 CDH20Q9HBT6 801 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 SSU72Q9NP77 194 aaKnown RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 POLR3KQ9Y2Y1 108 aaPredicted RBP10.57□□□□□ -0.72
SNX29-207ENST00000568949 GPR45Q9Y5Y3 372 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 AUP1Q9Y679 476 aa10.57□□□□□ -0.72
SNX29-207ENST00000568949 A0A1B0GUS0 222 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 MFN2O95140 757 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 IGHV3-13P01766 116 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 LCKP06239 509 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 OR8G3PP0DMU2 310 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 ZNF12P17014 697 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 MDKP21741 143 aaPredicted RBP10.56□□□□□ -0.72
SNX29-207ENST00000568949 CBLP22681 906 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 ZNF81P51508 661 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 UCP2P55851 309 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 DSTNP60981 165 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 ERVS71-1P61550 626 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 UFM1P61960 85 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 PUDPQ08623 228 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 ZNF154Q13106 437 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 RPS26P11Q5JNZ5 115 aaPredicted RBP10.56□□□□□ -0.72
SNX29-207ENST00000568949 LEG1Q6P5S2 330 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 DPPA2Q7Z7J5 298 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 SLC22A24Q8N4F4 322 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 ZNF781Q8N8C0 355 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 CPEB3Q8NE35 698 aaKnown RBP10.56□□□□□ -0.72
SNX29-207ENST00000568949 OR1J2Q8NGS2 313 aa10.56□□□□□ -0.72
SNX29-207ENST00000568949 DNAJA4Q8WW22 397 aaPredicted RBP10.56□□□□□ -0.72
SNX29-207ENST00000568949 CCL17Q92583 94 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms