RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 HINT3Q9NQE9 182 aaKnown RBP12.64□□□□□ -0.39
USB1-214ENST00000568848 THAP1Q9NVV9 213 aa12.64□□□□□ -0.39
USB1-214ENST00000568848 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 TRAV36DV7A0A075B6V5 113 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 IGHV3OR16-10A0A075B7F0 116 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 C17orf100A8MU93 164 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 TPST2O60704 377 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 FZD7O75084 574 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 KRT75O95678 551 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 FSHBP01225 129 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 LCKP06239 509 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 ANXA11P50995 505 aaKnown RBP12.63□□□□□ -0.39
USB1-214ENST00000568848 BIDP55957 195 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 SPATA46Q5T0L3 261 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 FAM69AQ5T7M9 428 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 RGS7BPQ6MZT1 257 aaPredicted RBP12.63□□□□□ -0.39
USB1-214ENST00000568848 C6orf89Q6UWU4 347 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 C10orf53Q8N6V4 93 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 ANKK1Q8NFD2 765 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 IL17RDQ8NFM7 739 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 DVL3Q92997 716 aaPredicted RBP12.63□□□□□ -0.39
USB1-214ENST00000568848 SLC38A4Q969I6 547 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 ZNF48Q96MX3 618 aaPredicted RBP12.63□□□□□ -0.39
USB1-214ENST00000568848 ZNF416Q9BWM5 594 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 NKIRAS1Q9NYS0 192 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 UBAP1Q9NZ09 502 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 RPS6KB2Q9UBS0 482 aa12.63□□□□□ -0.39
USB1-214ENST00000568848 A0A096LPI6 279 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 IGHV1-69-2A0A0G2JMI3 117 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 A0A0G2JMP0 313 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 A0A0X1KG70 313 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 DNAJC9-AS1A6NH13 148 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 TPD52L2O43399 206 aaKnown RBP12.62□□□□□ -0.39
USB1-214ENST00000568848 ANP32DO95626 131 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 BCL10O95999 233 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 OR8G3PP0DMU2 310 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 AHCYP23526 432 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 PAX7P23759 505 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 RAD52P43351 418 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 SLC18A1P54219 525 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 SEC61A1P61619 476 aaKnown RBP12.62□□□□□ -0.39
USB1-214ENST00000568848 PMS2P3Q13401 168 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 ALG10BQ5I7T1 473 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 OGFOD2Q6N063 350 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 SLC2A7Q6PXP3 512 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 KIRREL3Q8IZU9 778 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 SLC30A7Q8NEW0 376 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 OR4M2Q8NGB6 313 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 NFKBIDQ8NI38 313 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 UNKLQ9H9P5 680 aaKnown RBP12.62□□□□□ -0.39
USB1-214ENST00000568848 MOV10Q9HCE1 1003 aaKnown RBP12.62□□□□□ -0.39
USB1-214ENST00000568848 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 ZNF69Q9UC07 566 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 SLC7A8Q9UHI5 535 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 ZNF232Q9UNY5 417 aa12.62□□□□□ -0.39
USB1-214ENST00000568848 A0A0G2JPF8 293 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 ISPDA4D126 451 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 HNRNPCL2B2RXH8 293 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 HNRNPCL3B7ZW38 293 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 HDAC3O15379 428 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 SPRY3O43610 288 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 HNRNPCL1O60812 293 aaKnown RBP12.61□□□□□ -0.39
USB1-214ENST00000568848 HNRNPCL4P0DMR1 293 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 HKR1P10072 659 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 OMGP23515 440 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 MPV17P39210 176 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 LIMS1P48059 325 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 CSNK1A1P48729 337 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 RBBP4Q09028 425 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 KLF17Q5JT82 389 aaPredicted RBP12.61□□□□□ -0.39
USB1-214ENST00000568848 C6orf10Q5SRN2 563 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 AGBL2Q5U5Z8 902 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 NXNQ6DKJ4 435 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 TMEM154Q6P9G4 183 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 TREML4Q6UXN2 200 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 MAVSQ7Z434 540 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 SYNPRQ8TBG9 265 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 LRRC58Q96CX6 371 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 SLC41A3Q96GZ6 507 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 JMJD8Q96S16 334 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 ZNF696Q9H7X3 374 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 SLC52A3Q9NQ40 469 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 DDX28Q9NUL7 540 aaKnown RBP12.61□□□□□ -0.39
USB1-214ENST00000568848 CALML5Q9NZT1 146 aa12.61□□□□□ -0.39
USB1-214ENST00000568848 MDFIC2A0A1B0GVS7 189 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 ZNF726A6NNF4 738 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 PLPP3O14495 311 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 AKAP8O43823 692 aaKnown RBP12.6□□□□□ -0.39
USB1-214ENST00000568848 SERPINA5P05154 406 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 AQP1P29972 269 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 KLF3P57682 345 aaPredicted RBP12.6□□□□□ -0.39
USB1-214ENST00000568848 RPS23P62266 143 aaKnown RBP12.6□□□□□ -0.39
USB1-214ENST00000568848 PUDPQ08623 228 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 LRFN4Q6PJG9 635 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 ZNF627Q7L945 461 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 CCDC36Q8IYA8 594 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 SLC22A24Q8N4F4 322 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 LRRC17Q8N6Y2 441 aa12.6□□□□□ -0.39
USB1-214ENST00000568848 OR4K5Q8NGD3 323 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms