RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 KRT73Q86Y46 540 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 FUNDC1Q8IVP5 155 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 SKA3Q8IX90 412 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 PAQR4Q8N4S7 273 aaPredicted RBP13.3□□□□□ -0.28
NME3-211ENST00000568561 TSPAN32Q96QS1 320 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 SPATA5L1Q9BVQ7 753 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 MRPL39Q9NYK5 338 aaKnown RBP13.3□□□□□ -0.28
NME3-211ENST00000568561 VAPAQ9P0L0 249 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 USH1CQ9Y6N9 552 aa13.3□□□□□ -0.28
NME3-211ENST00000568561 MEGF8Q7Z7M0 2845 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 CDC14BO60729 498 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 RP2O75695 350 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 UBL3O95164 117 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 CLPTM1O96005 669 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 GAAP10253 952 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 CCL2P13500 99 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 STX1BP61266 288 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 MAGOHP61326 146 aaKnown RBP13.29□□□□□ -0.28
NME3-211ENST00000568561 ERVS71-1P61550 626 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 ACTG1P63261 375 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 MELKQ14680 651 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 NKPD1Q17RQ9 610 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 AVPI1Q5T686 147 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 EPGNQ6UW88 154 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 PXKQ7Z7A4 578 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 SMYD1Q8NB12 490 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 OR6S1Q8NH40 331 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 SH3GL3Q99963 347 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 NKIRAS1Q9NYS0 192 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 CCDC167Q9P0B6 97 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 SLC13A4Q9UKG4 626 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 GRIP1Q9Y3R0 1128 aa13.29□□□□□ -0.28
NME3-211ENST00000568561 TRBV5-3A0A0A0MS03 114 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 KPNA4O00629 521 aaPredicted RBP13.28□□□□□ -0.28
NME3-211ENST00000568561 TFP02787 698 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 OPN1SWP03999 348 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 LSP1P33241 339 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 LMO4P61968 165 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 FAHD2BQ6P2I3 314 aaPredicted RBP13.28□□□□□ -0.28
NME3-211ENST00000568561 BLOC1S3Q6QNY0 202 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 SLC35D2Q76EJ3 337 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 RANBP3LQ86VV4 465 aaPredicted RBP13.28□□□□□ -0.28
NME3-211ENST00000568561 SNX32Q86XE0 403 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 ARMC8Q8IUR7 673 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 OR5J2Q8NH18 312 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 OR51F2Q8NH61 342 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 GTF3AQ92664 365 aaKnown RBP13.28□□□□□ -0.28
NME3-211ENST00000568561 SPDL1Q96EA4 605 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 FAHD2AQ96GK7 314 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 MCHR1Q99705 422 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 EBF4Q9BQW3 602 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 TMEM43Q9BTV4 400 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 TCF7L2Q9NQB0 619 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 TAAR3PQ9P1P4 343 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.28□□□□□ -0.28
NME3-211ENST00000568561 SLC7A8Q9UHI5 535 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 RAB21Q9UL25 225 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 ARHGAP32A7KAX9 2087 aa13.28□□□□□ -0.28
NME3-211ENST00000568561 LOC105371242A0A075B767 164 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 PRORSD1PA6NEY8 169 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 CPSF4LA6NMK7 179 aaKnown RBP13.27□□□□□ -0.29
NME3-211ENST00000568561 POLR3GO15318 223 aaPredicted RBP13.27□□□□□ -0.29
NME3-211ENST00000568561 AVPP01185 164 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 SERPINA5P05154 406 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 SLC6A2P23975 617 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 CCL8P80075 99 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 MVKQ03426 396 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 GLO1Q04760 184 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 NPTX1Q15818 432 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 REP15Q6BDI9 236 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 RGS7BPQ6MZT1 257 aaPredicted RBP13.27□□□□□ -0.29
NME3-211ENST00000568561 C1orf229Q6ZS94 237 aaPredicted RBP13.27□□□□□ -0.29
NME3-211ENST00000568561 ZNF771Q7L3S4 317 aaPredicted RBP13.27□□□□□ -0.29
NME3-211ENST00000568561 CROCCP2Q86T23 111 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 SLC22A24Q8N4F4 322 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 LRRC17Q8N6Y2 441 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 ICA1LQ8NDH6 482 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 SLC30A7Q8NEW0 376 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 TMEM54Q969K7 222 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 ZNF607Q96SK3 696 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 SLC52A3Q9NQ40 469 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 GLTPQ9NZD2 209 aa13.27□□□□□ -0.29
NME3-211ENST00000568561 WIPF1O43516 503 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 OR6A2O95222 327 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 CH25HO95992 272 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 THY1P04216 161 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 PPIBP23284 216 aaKnown RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 TMEM33P57088 247 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 RBBP4Q09028 425 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 SWT1Q5T5J6 900 aaKnown RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 LRFN4Q6PJG9 635 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 PIWIL3Q7Z3Z3 882 aaKnown RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 TSPYL5Q86VY4 417 aaPredicted RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 RBM45Q8IUH3 476 aaKnown RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 OR4K5Q8NGD3 323 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 VANGL1Q8TAA9 524 aaPredicted RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 ZNF418Q8TF45 676 aaPredicted RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 ARHGDIGQ99819 225 aa13.26□□□□□ -0.29
NME3-211ENST00000568561 CPPED1Q9BRF8 314 aaPredicted RBP13.26□□□□□ -0.29
NME3-211ENST00000568561 ZNF416Q9BWM5 594 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms