RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PAPOLBQ9NRJ5 636 aaKnown RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 KRT84Q9NSB2 600 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 MRPL39Q9NYK5 338 aaKnown RBP6.88□□□□□ -1.31
SMG1-214ENST00000568038 TAS2R5Q9NYW4 299 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 IL20RAQ9UHF4 553 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 ST6GALNAC2Q9UJ37 374 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 CLEC4AQ9UMR7 237 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 OSGIN2Q9Y236 505 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 SIGLEC7Q9Y286 467 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 MYRFQ9Y2G1 1151 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 SHANK1Q9Y566 2161 aa6.88□□□□□ -1.31
SMG1-214ENST00000568038 COL6A6A6NMZ7 2263 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 C9orf118A6NHY6 69 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 H3BN98 237 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 DNPH1O43598 174 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 CYTIPO60759 359 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 FZD7O75084 574 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 NDUFB2O95178 105 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 RCBTB2O95199 551 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 PLGP00747 810 aaPredicted RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 ALPLP05186 524 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 OSMP13725 252 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 HLA-DOBP13765 273 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ZNF26P17031 533 aaPredicted RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 UQCRC1P31930 480 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 PTGER4P35408 488 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 RPL4P36578 427 aaKnown RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 P2RY4P51582 365 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ALDH3A2P51648 485 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 CASP6P55212 293 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 FXYD6P3P58550 94 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 CTXN1P60606 82 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 PRPS1P60891 318 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ERVK-25P63136 954 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 H3F3AP84243 136 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 PPP2R2BQ00005 443 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 PUDPQ08623 228 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 RASGEF1BQ0VAM2 473 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ZP4Q12836 540 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 COX10Q12887 443 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 TOP3AQ13472 1001 aaPredicted RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 FHL1Q13642 323 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 C1DQ13901 141 aaKnown RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 TAF11Q15544 211 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ZIK1Q3SY52 487 aaPredicted RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 SLC36A3Q495N2 470 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ALG10Q5BKT4 473 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 CLEC12AQ5QGZ9 265 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 NSUN5P2Q63ZY6 315 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ABLIM2Q6H8Q1 611 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 RTL6Q6ICC9 239 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 SMARCD3Q6STE5 483 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 B3GNT6Q6ZMB0 384 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ZNF620Q6ZNG0 422 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 Q6ZPB1 254 aaPredicted RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 ADGRE4PQ86SQ3 457 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 GCNT2Q8N0V5 402 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 SCAIQ8N9R8 606 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 C9orf106Q8NAJ2 232 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 DNAJC9Q8WXX5 260 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 SAMD8Q96LT4 415 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 OXGR1Q96P68 337 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 TSSK6Q9BXA6 273 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 PLA2G12AQ9BZM1 189 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ENKD1Q9H0I2 346 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 OR52D1Q9H346 318 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 TP63Q9H3D4 680 aaPredicted RBP6.87□□□□□ -1.31
SMG1-214ENST00000568038 RIBC2Q9H4K1 309 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 CALHM2Q9HA72 323 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 INIPQ9NRY2 104 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 TBC1D23Q9NUY8 699 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 USE1Q9NZ43 259 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 CLCF1Q9UBD9 225 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 RASD1Q9Y272 281 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 B3GALT5Q9Y2C3 310 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 POFUT2Q9Y2G5 429 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ZNF175Q9Y473 711 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 FAM215AQ9Y5M1 114 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 ORC6Q9Y5N6 252 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 CDH10Q9Y6N8 788 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 USP24Q9UPU5 2620 aa6.87□□□□□ -1.31
SMG1-214ENST00000568038 KIAA1549Q9HCM3 1950 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 ATRXP46100 2492 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 CD8B2A6NJW9 211 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 MCIDASD6RGH6 385 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 TOXO94900 526 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 PPP1R3DO95685 299 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 SNAP29O95721 258 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 HOXD4P09016 255 aaPredicted RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 FCGR2AP12318 317 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 ZNF43P17038 809 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 GNLYP22749 145 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 SLC6A6P31641 620 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 POLR2IP36954 125 aaKnown RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 CA7P43166 264 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 UQCRFS1P47985 274 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 PTDSS1P48651 473 aaKnown RBP6.86□□□□□ -1.31
SMG1-214ENST00000568038 CRISP1P54107 249 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 RAD23AP54725 363 aa6.86□□□□□ -1.31
SMG1-214ENST00000568038 PER3P56645 1201 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms