RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 ABHD12BQ7Z5M8 362 aaPredicted RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 CDC20BQ86Y33 519 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 GPR137CQ8N3F9 429 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 HDAC2Q92769 488 aaKnown RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 DUS3LQ96G46 650 aaKnown RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 KCNK17Q96T54 332 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 CLEC4MQ9H2X3 399 aaPredicted RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 CRLF2Q9HC73 371 aa10.87□□□□□ -0.67
RNF40-211ENST00000567365 TEP1Q99973 2627 aaKnown RBP10.87□□□□□ -0.67
RNF40-211ENST00000567365 ARPC4-TTLL3A0A0A6YYG9 625 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 A0A1W2PRG6 482 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CIB4A0PJX0 185 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 DPRXA6NFQ7 191 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 ZNF99A8MXY4 864 aaPredicted RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 MCIDASD6RGH6 385 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 M0R3G1 203 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 TNFRSF11BO00300 401 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CASKO14936 926 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 TRMUO75648 421 aaKnown RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 CD14P08571 375 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 HOXB1P14653 301 aaPredicted RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 ACADSP16219 412 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CSNK1A1P48729 337 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CTXN1P60606 82 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 PRPS1P60891 318 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 RPL27P61353 136 aaKnown RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 ARF1P84077 181 aaKnown RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 PPP1R8Q12972 351 aaKnown RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 TSPAN31Q12999 210 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CCNIQ14094 377 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 GK3PQ14409 553 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 PPA1Q15181 289 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 HIKESHIQ53FT3 197 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 NCMAPQ5T1S8 102 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CARD17Q5XLA6 110 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 ANKRD16Q6P6B7 361 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 RRM2BQ7LG56 351 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 WFDC8Q8IUA0 241 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CDK20Q8IZL9 346 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 ZNF566Q969W8 418 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 RSRC1Q96IZ7 334 aaKnown RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 TSPAN32Q96QS1 320 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 OBP2BQ9NPH6 170 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 GLTPQ9NZD2 209 aa10.86□□□□□ -0.67
RNF40-211ENST00000567365 CRNNQ9UBG3 495 aaPredicted RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 ZNF346Q9UL40 294 aaKnown RBP10.86□□□□□ -0.67
RNF40-211ENST00000567365 MAP1AP78559 2803 aaPredicted RBP10.85□□□□□ -0.67
RNF40-211ENST00000567365 IGKV1D-43A0A0B4J1Z2 117 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 ZNF503-AS2A6NEH8 195 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 EBAG9O00559 213 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 OR10H3O60404 316 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 FKBP6O75344 327 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 NDUFB2O95178 105 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 STAMBPO95630 424 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 TXNDC12O95881 172 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 IGHG1P01857 330 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 C10orf128Q5T292 105 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 HMBOX1Q6NT76 420 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 CCDC121Q6ZUS5 278 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 TMEM179BQ7Z7N9 219 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 IGFN1Q86VF2 1251 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 SPATA24Q86W54 205 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 LINC00471Q8N535 108 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 ARIH2OSQ8N7S6 290 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 NOXO1Q8NFA2 376 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 OR9Q2Q8NGE9 314 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 OR52N5Q8NH56 324 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 MCHR2Q969V1 340 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 PLPPR2Q96GM1 343 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 ALG12Q9BV10 488 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 KATNB1Q9BVA0 655 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 POLDIP3Q9BY77 421 aaKnown RBP10.85□□□□□ -0.67
RNF40-211ENST00000567365 ULBP2Q9BZM5 246 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 NTN4Q9HB63 628 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 NRIP3Q9NQ35 241 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 B3GNT2Q9NY97 397 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 ZNF224Q9NZL3 707 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 STX18Q9P2W9 335 aaKnown RBP10.85□□□□□ -0.67
RNF40-211ENST00000567365 TMCC3Q9ULS5 477 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 AURKCQ9UQB9 309 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 AMDHD2Q9Y303 409 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 ADAM18Q9Y3Q7 739 aa10.85□□□□□ -0.67
RNF40-211ENST00000567365 SAMHD1Q9Y3Z3 626 aaKnown RBP10.85□□□□□ -0.67
RNF40-211ENST00000567365 CELSR1Q9NYQ6 3014 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 A0A1W2PR80 420 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 ARRDC5A6NEK1 342 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 UNC119BA6NIH7 251 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 KRT33AO76009 404 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 PLAUP00749 431 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 IGLV1-44P01699 117 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 TP53P04637 393 aaPredicted RBP10.84□□□□□ -0.67
RNF40-211ENST00000567365 APEHP13798 732 aaKnown RBP10.84□□□□□ -0.67
RNF40-211ENST00000567365 IFNGR2P38484 337 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 IST1P53990 364 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 ERVK-25P63136 954 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 MICAQ29983 383 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 RFX4Q33E94 735 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 MESTQ5EB52 335 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 FAM205BPQ63HN1 556 aa10.84□□□□□ -0.67
RNF40-211ENST00000567365 SLC25A47Q6Q0C1 308 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms