RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 TMEM41BQ5BJD5 291 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ZNF628Q5EBL2 1059 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 EEF1A1P5Q5VTE0 462 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 HEPHL1Q6MZM0 1159 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 TMEM207Q6UWW9 146 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ALKAL2Q6UX46 152 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 LNX2Q8N448 690 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OR13C2Q8NGS9 318 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 TOMM40LQ969M1 308 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 YIPF5Q969M3 257 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SGK3Q96BR1 496 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 NKX3-1Q99801 234 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 QRSL1Q9H0R6 528 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 CDH20Q9HBT6 801 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 GALNT9Q9HCQ5 603 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 TAS2R5Q9NYW4 299 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 C5AR2Q9P296 337 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 GPR55Q9Y2T6 319 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 TMEM184BQ9Y519 407 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ACTL7AQ9Y615 435 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ADAMTSL1Q8N6G6 1762 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 KIR2DS1A0A191URI9 304 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 RPS10-NUDT3A0A1W2PQS6 291 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 TRIM64A6NGJ6 449 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 FAM183AA6NL82 134 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 MEIS3P2A8K0S8 358 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PRSS44E7EML9 344 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PPP1R2P9O14990 202 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SCAMP1O15126 338 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OIP5O43482 229 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 LILRB5O75023 590 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 VAMP5O95183 116 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 CNOT4O95628 575 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 F11P03951 625 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SNRNP70P08621 437 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 IRF2P14316 349 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ADRA2CP18825 462 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 CTHP32929 405 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 KIR2DS4P43632 304 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 RPS10P46783 165 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 FOXK1P85037 733 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 KIR2DS1Q14954 304 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 MPPED2Q15777 294 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 FAM162BQ5T6X4 162 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 CD300LDQ6UXZ3 194 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SKA3Q8IX90 412 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 C12orf76Q8N812 135 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 DTX3Q8N9I9 347 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OR51L1Q8NGJ5 315 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OR6K3Q8NGY3 331 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 APH1BQ8WW43 257 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 HAS2Q92819 552 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 NAT6Q93015 286 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SMIM19Q96E16 107 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 RBMXL1Q96E39 390 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 MAP6Q96JE9 813 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 LCORQ96JN0 433 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 LINC00615Q96LM1 132 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ZNF681Q96N22 645 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 DCBLD2Q96PD2 775 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 KCNJ15Q99712 375 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SSX3Q99909 188 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ST6GALNAC5Q9BVH7 336 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 NKX6-2Q9C056 277 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 HRH4Q9H3N8 390 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ATP13A2Q9NQ11 1180 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PLEK2Q9NYT0 353 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 MCTS1Q9ULC4 181 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 GOLGA4Q13439 2230 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PRR33A8MZF0 331 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ZNF593O00488 134 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 RGS13O14921 159 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PRSS23O95084 383 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 CCNOP22674 350 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 APLNRP35414 380 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 HMGA2P52926 109 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 CSNK1G2P78368 415 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 HYAL1Q12794 435 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SSX2Q16385 188 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 LYSMD4Q5XG99 296 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OR10K2Q6IF99 312 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 H3F3CQ6NXT2 135 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PAPD4Q6PIY7 484 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PRICKLE2Q7Z3G6 844 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 MMP21Q8N119 569 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ANKRD53Q8N9V6 530 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ZNF485Q8NCK3 441 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ZNF680Q8NEM1 530 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OR1M1Q8NGA1 313 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OR14L1PQ8NHC6 308 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 SMIM4Q8WVI0 70 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ANKRD9Q96BM1 317 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PHYHIPLQ96FC7 376 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 FAM71F1Q96KD3 344 aaPredicted RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 OPALINQ96PE5 141 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 TNFRSF13CQ96RJ3 184 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 PAPOLGQ9BWT3 736 aaKnown RBP4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 ZDHHC5Q9C0B5 715 aa4.01□□□□□ -1.77
LPCAT2-208ENST00000566915 CHST8Q9H2A9 424 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms