RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 DPYSQ14117 519 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 MESDQ14696 234 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HEPACAMQ14CZ8 416 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 IRF4Q15306 451 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 TRADDQ15628 312 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SYPL1Q16563 259 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 LINC00303Q3SY05 128 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD20A8PQ5CZ79 823 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 RABGAP1LQ5R372 815 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 MPP7Q5T2T1 576 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HES3Q5TGS1 186 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 OR5M10Q6IEU7 315 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 STEAP1BQ6NZ63 245 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 PNCKQ6P2M8 343 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 DNAJC24Q6P3W2 148 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CASC4Q6P4E1 433 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 FAM199XQ6PEV8 388 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 CES3Q6UWW8 571 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ADAMTSL5Q6ZMM2 481 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 RBM43Q6ZSC3 357 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 SETD3Q86TU7 594 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PHF13Q86YI8 300 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PQLC3Q8N755 202 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ATP6V0D2Q8N8Y2 350 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 C20orf203Q8NBC4 194 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SPC24Q8NBT2 197 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CCNYQ8ND76 341 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 GPR26Q8NDV2 337 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 NEK11Q8NG66 645 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 OR2T34Q8NGX1 318 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SETD6Q8TBK2 473 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ZNF596Q8TC21 504 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SLC22A8Q8TCC7 542 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 UBLCP1Q8WVY7 318 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PIH1D2Q8WWB5 315 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 OR8D1Q8WZ84 308 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 KRT35Q92764 455 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 FGF11Q92914 225 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HAUS1Q96CS2 278 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 TBC1D31Q96DN5 1066 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SERPINB11Q96P15 392 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 CSPG4P5Q96PW8 444 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 RUFY1Q96T51 708 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SPIN2AQ99865 258 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SPIN2BQ9BPZ2 258 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 DDX50Q9BQ39 737 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 ZNF2Q9BSG1 426 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 APOOQ9BUR5 198 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SNRNP25Q9BV90 132 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 RIOK2Q9BVS4 552 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 TBC1D10AQ9BXI6 508 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ACPTQ9BZG2 426 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ZYG11BQ9C0D3 744 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 XPO4Q9C0E2 1151 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 LRRN3Q9H3W5 708 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 TSPY26PQ9H489 355 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 FAM124BQ9H5Z6 455 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PRORYQ9H606 182 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 LRRC19Q9H756 370 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 NHEJ1Q9H9Q4 299 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 SGK2Q9HBY8 427 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 NT5MQ9NPB1 228 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 STARD5Q9NSY2 213 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ANO10Q9NW15 660 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 RBM22Q9NW64 420 aaKnown RBP eCLIP0.99□□□□□ -2.25
SMG1-212ENST00000566328 SLCO1C1Q9NYB5 712 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 AIPL1Q9NZN9 384 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 GALPQ9UBC7 116 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 LHX3Q9UBR4 397 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ANAPC7Q9UJX3 599 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HPCAL4Q9UM19 191 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 PRPF19Q9UMS4 504 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PACSIN2Q9UNF0 486 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PSMD13Q9UNM6 376 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 KCNK6Q9Y257 313 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 HS3ST2Q9Y278 367 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 TTLL3Q9Y4R7 772 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ALG6Q9Y672 507 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 MRPS18BQ9Y676 258 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 ARL5AQ9Y689 179 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 NINQ8N4C6 2090 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 SPTAN1Q13813 2472 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 PKD1L2Q7Z442 2459 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 RP1L1Q8IWN7 2480 aaPredicted RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 SPTA1P02549 2419 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 EML6Q6ZMW3 1958 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 DIDO1Q9BTC0 2240 aaKnown RBP0.99□□□□□ -2.25
SMG1-212ENST00000566328 MYO18BQ8IUG5 2567 aa0.99□□□□□ -2.25
SMG1-212ENST00000566328 ALPK2Q86TB3 2170 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 DOCK10Q96BY6 2186 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 FREM3P0C091 2139 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 ESPL1Q14674 2120 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 FLNCQ14315 2725 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 HELZ2Q9BYK8 2649 aaKnown RBP0.98□□□□□ -2.25
SMG1-212ENST00000566328 PLXND1Q9Y4D7 1925 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 IGHV5-51A0A0C4DH38 117 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 IGHV5-10-1A0A0J9YXX1 117 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 C1orf232A0A0U1RR37 186 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 OR51F1A6NGY5 319 aa0.98□□□□□ -2.25
SMG1-212ENST00000566328 ARHGAP42A6NI28 874 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms