RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 HMGA2P52926 109 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 PRPS1P60891 318 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 CAMK2DQ13557 499 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 FLOT2Q14254 428 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 ANKDD1AQ495B1 522 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 KLHL24Q6TFL4 600 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 TMEM108Q6UXF1 575 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 OAFQ86UD1 273 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 LRRC75AQ8NAA5 344 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 OR13C2Q8NGS9 318 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 OR51A7Q8NH64 312 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 AKAP1Q92667 903 aaKnown RBP eCLIP12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 FAM46AQ96IP4 442 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 ADAD1Q96M93 576 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 TNFRSF13CQ96RJ3 184 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 LRMDAQ9H2I8 198 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 GPR35Q9HC97 309 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 OBP2BQ9NPH6 170 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 BEX4Q9NWD9 120 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 F8P00451 2351 aa12.11□□□□□ -0.47
HERPUD1-210ENST00000565966 A0A1W2PRG6 482 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 M0R3G1 203 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 RAP2AP10114 183 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF26P17031 533 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 PTAFRP25105 342 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF83P51522 516 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 CEACAM16Q2WEN9 425 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 TBRG1Q3YBR2 411 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ALG10Q5BKT4 473 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ANKRD16Q6P6B7 361 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ZER1Q7Z7L7 766 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF611Q8N823 705 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 OR6N1Q8NGY5 312 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 LILRB1Q8NHL6 650 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 MAGEE2Q8TD90 523 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 CANT1Q8WVQ1 401 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 BCL2L2Q92843 193 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 TMEM54Q969K7 222 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF837Q96EG3 531 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 SLC25A44Q96H78 314 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 RADILQ96JH8 1075 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 CCL19Q99731 98 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 GPA33Q99795 319 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 C1QTNF6Q9BXI9 259 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 MMADHCQ9H3L0 296 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 KRCC1Q9NPI7 259 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 B3GAT2Q9NPZ5 323 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 TMCC3Q9ULS5 477 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 MGAT4BQ9UQ53 548 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 AURKCQ9UQB9 309 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 LYVE1Q9Y5Y7 322 aa12.1□□□□□ -0.47
HERPUD1-210ENST00000565966 TCRBV3S1A0A5B6 114 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 DHRS12A0PJE2 317 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 NPIPB13A6NJU9 1138 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 NPIPB4C9JG80 1138 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 MCIDASD6RGH6 385 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 TNFRSF11BO00300 401 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ABCD4O14678 606 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 PTP4A3O75365 173 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 KRT36O76013 467 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 CD40P25942 277 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 CSNK1A1P48729 337 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 DAP3P51398 398 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 CTXN1P60606 82 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 UBE2NP61088 152 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ARF1P84077 181 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 RUNX1T1Q06455 604 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF672Q499Z4 452 aaPredicted RBP12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ARMC4Q5T2S8 1044 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 OR2T5Q6IEZ7 315 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 CCDC121Q6ZUS5 278 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ASRGL1Q7L266 308 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 IGFN1Q86VF2 1251 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 SPATA24Q86W54 205 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 OR4C15Q8NGM1 316 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 OR2T29Q8NH02 315 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ASB10Q8WXI3 467 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 FBXW5Q969U6 566 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF566Q969W8 418 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 CHID1Q9BWS9 393 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ULBP2Q9BZM5 246 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 TXNIPQ9H3M7 391 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 NELFAQ9H3P2 528 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 VNN3Q9NY84 501 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 GLTPQ9NZD2 209 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 ZNF346Q9UL40 294 aaKnown RBP12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 SIGLEC7Q9Y286 467 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 CELSR1Q9NYQ6 3014 aa12.09□□□□□ -0.47
HERPUD1-210ENST00000565966 A0A096LPE4 126 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 ARPC4-TTLL3A0A0A6YYG9 625 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 A0A1W2PPZ6 126 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 UNC119BA6NIH7 251 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 ZNF99A8MXY4 864 aaPredicted RBP12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 M0R1B8 84 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 OR10H3O60404 316 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms