RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 SLC25A44Q96H78 314 aaPredicted RBP17.18■□□□□ 0.34
CLN6-206ENST00000565471 PRSS27Q9BQR3 290 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 POLR2J2Q9GZM3 115 aaKnown RBP17.18■□□□□ 0.34
CLN6-206ENST00000565471 POLR2J3Q9H1A7 115 aaKnown RBP17.18■□□□□ 0.34
CLN6-206ENST00000565471 GLTPQ9NZD2 209 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 CDC42EP3Q9UKI2 254 aa17.18■□□□□ 0.34
CLN6-206ENST00000565471 TMEM129A0AVI4 362 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 KPNA4O00629 521 aaPredicted RBP17.17■□□□□ 0.34
CLN6-206ENST00000565471 MRASO14807 208 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 RNF13O43567 381 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 ENTPD5O75356 428 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 RAB36O95755 333 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 HIST1H2ABP04908 130 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 ZNF35P13682 527 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 RBM34P42696 430 aaKnown RBP17.17■□□□□ 0.34
CLN6-206ENST00000565471 PIGFQ07326 219 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 GGTLC2Q14390 218 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 REP15Q6BDI9 236 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 KRT80Q6KB66 452 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 HIST3H2AQ7L7L0 130 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 CXXC5Q7LFL8 322 aaKnown RBP17.17■□□□□ 0.34
CLN6-206ENST00000565471 LRRC17Q8N6Y2 441 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 ZNF540Q8NDQ6 660 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 HIST1H2ACQ93077 130 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 ZNF566Q969W8 418 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 MS4A3Q96HJ5 214 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 FOXN4Q96NZ1 517 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 MEPEQ9NQ76 525 aaPredicted RBP17.17■□□□□ 0.34
CLN6-206ENST00000565471 SAR1AQ9NR31 198 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 FGFR1OP2Q9NVK5 253 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 SH3GLB1Q9Y371 365 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 CMAHPQ9Y471 501 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 SPEF1Q9Y4P9 236 aa17.17■□□□□ 0.34
CLN6-206ENST00000565471 IGF2P01344 180 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 IFNA14P01570 189 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 UMPSP11172 480 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 ZNF16P17020 682 aaPredicted RBP17.16■□□□□ 0.34
CLN6-206ENST00000565471 GIPRP48546 466 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 PTDSS1P48651 473 aaKnown RBP17.16■□□□□ 0.34
CLN6-206ENST00000565471 EVX1P49640 407 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 RAB1AP62820 205 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 NANOGNBQ7Z5D8 188 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 ZNF583Q96ND8 569 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 KCNK17Q96T54 332 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 DYNLRB1Q9NP97 96 aa17.16■□□□□ 0.34
CLN6-206ENST00000565471 OR5F1O95221 314 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 BCL10O95999 233 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 MT-ND1P03886 318 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 FAM157CP0CG43 387 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 PGA4P0DJD7 388 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 PGA3P0DJD8 388 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 GIFP27352 417 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 GLRXP35754 106 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 TAS2R41P59536 307 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 MELKQ14680 651 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 CARTPTQ16568 116 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 CGB2Q6NT52 195 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 LRFN4Q6PJG9 635 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 SKA3Q8IX90 412 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 CDK20Q8IZL9 346 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 SLC22A24Q8N4F4 322 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 PCYOX1LQ8NBM8 494 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 SPATA3Q8NHX4 192 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 MRPL24Q96A35 216 aaKnown RBP17.15■□□□□ 0.34
CLN6-206ENST00000565471 TMEM38BQ9NVV0 291 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 GID8Q9NWU2 228 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 LPAR3Q9UBY5 353 aa17.15■□□□□ 0.34
CLN6-206ENST00000565471 IGHV4-61A0A0C4DH41 118 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 FAM220BPB1ANY3 271 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 CENPBD1B2RD01 187 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 DHHO43323 396 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 STAMBPO95630 424 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 IGHG1P01857 330 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 IGFBP1P08833 259 aaPredicted RBP17.14■□□□□ 0.33
CLN6-206ENST00000565471 OR8G3PP0DMU2 310 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 THRBP10828 461 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 APEHP13798 732 aaKnown RBP17.14■□□□□ 0.33
CLN6-206ENST00000565471 DAOP14920 347 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 RPS23P62266 143 aaKnown RBP17.14■□□□□ 0.33
CLN6-206ENST00000565471 NRN1LQ496H8 165 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 DEF8Q6ZN54 512 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 HDDC2Q7Z4H3 204 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 DPPA2Q7Z7J5 298 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 NKAIN4Q8IVV8 208 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 C10orf82Q8WW14 230 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 LIPHQ8WWY8 451 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 BPESC1Q9GZL8 116 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 RIMS3Q9UJD0 308 aa17.14■□□□□ 0.33
CLN6-206ENST00000565471 BLOC1S5-TXNDC5H3BN57 136 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 SLC22A2O15244 555 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 SYNGR3O43761 229 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 LMX1BO60663 402 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 OR7A10O76100 309 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 FARS2O95363 451 aaKnown RBP17.13■□□□□ 0.33
CLN6-206ENST00000565471 SERPINA5P05154 406 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 ZNF23P17027 643 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 TNFRSF1BP20333 461 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 LSP1P33241 339 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 UGT2B15P54855 530 aa17.13■□□□□ 0.33
CLN6-206ENST00000565471 GALK2Q01415 458 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms