RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 FGFBP3Q8TAT2 258 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 TMEM255BQ8WV15 326 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 C10orf82Q8WW14 230 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 RASSF5Q8WWW0 418 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 TMEM54Q969K7 222 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF583Q96ND8 569 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 DOK1Q99704 481 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 SH3GL1Q99961 368 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 GLTPQ9NZD2 209 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 ARMCX1Q9P291 453 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF229Q9UJW7 825 aa8.67□□□□□ -1.02
CMTM3-209ENST00000565003 IGHV4-61A0A0C4DH41 118 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 FAM220BPB1ANY3 271 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 NPPAP01160 153 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 F13BP05160 661 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 VIMP08670 466 aaKnown RBP8.66□□□□□ -1.02
CMTM3-209ENST00000565003 PATE4P0C8F1 98 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 IGHV4-31P0DP07 118 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 UMPSP11172 480 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF35P13682 527 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF16P17020 682 aaPredicted RBP8.66□□□□□ -1.02
CMTM3-209ENST00000565003 NR4A1P22736 598 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 NR4A2P43354 598 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 OR1E2P47887 323 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 GIPRP48546 466 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 PDLIM4P50479 330 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 TAS2R41P59536 307 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
CMTM3-209ENST00000565003 GUCY1A3Q02108 690 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 RPL18Q07020 188 aaKnown RBP8.66□□□□□ -1.02
CMTM3-209ENST00000565003 PIN1Q13526 163 aaPredicted RBP8.66□□□□□ -1.02
CMTM3-209ENST00000565003 DAG1Q14118 895 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 GGTLC2Q14390 218 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 MAPRE2Q15555 327 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 CARTPTQ16568 116 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 LRRC23Q53EV4 343 aaPredicted RBP8.66□□□□□ -1.02
CMTM3-209ENST00000565003 ERICH5Q6P6B1 374 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 LRFN4Q6PJG9 635 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 SPATA21Q7Z572 469 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 NANOGNBQ7Z5D8 188 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF584Q8IVC4 421 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 SKA3Q8IX90 412 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 IL17RDQ8NFM7 739 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF566Q969W8 418 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 FOXN4Q96NZ1 517 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 PIMREGQ9BSJ6 248 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 C20orf141Q9NUB4 165 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 MRGBPQ9NV56 204 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 GMPR2Q9P2T1 348 aaKnown RBP8.66□□□□□ -1.02
CMTM3-209ENST00000565003 BAG5Q9UL15 447 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 CUBNO60494 3623 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 ATRQ13535 2644 aa8.66□□□□□ -1.02
CMTM3-209ENST00000565003 LOC390937A0A1W2PQ73 354 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 SH3PXD2BA1X283 911 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 BLOC1S5-TXNDC5H3BN57 136 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 NDUFS8O00217 210 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 OR7A10O76100 309 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 UBL3O95164 117 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 OR5F1O95221 314 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RAB36O95755 333 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 MT-ND1P03886 318 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 HIST1H2ABP04908 130 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 FUT1P19526 365 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RBM34P42696 430 aaKnown RBP8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RAB1AP62820 205 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RUNX1T1Q06455 604 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RAB39AQ14964 217 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 HIST3H3Q16695 136 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 CHRFAM7AQ494W8 412 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 CYBRD1Q53TN4 286 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 HIST3H2AQ7L7L0 130 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 PIWIL3Q7Z3Z3 882 aaKnown RBP8.65□□□□□ -1.02
CMTM3-209ENST00000565003 SLC22A24Q8N4F4 322 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 POU5F2Q8N7G0 328 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 NOXO1Q8NFA2 376 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 OR2T12Q8NG77 320 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 TMEM239Q8WW34 195 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 HIST1H2ACQ93077 130 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RCN3Q96D15 328 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 SLC25A44Q96H78 314 aaPredicted RBP8.65□□□□□ -1.02
CMTM3-209ENST00000565003 ZNF347Q96SE7 839 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 SH3GL3Q99963 347 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 MRPL37Q9BZE1 423 aaKnown RBP8.65□□□□□ -1.02
CMTM3-209ENST00000565003 BPESC1Q9GZL8 116 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RAB1BQ9H0U4 201 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 DENND2DQ9H6A0 471 aaPredicted RBP8.65□□□□□ -1.02
CMTM3-209ENST00000565003 CCDC134Q9H6E4 229 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 DYNLRB1Q9NP97 96 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 MYOZ1Q9NP98 299 aaPredicted RBP8.65□□□□□ -1.02
CMTM3-209ENST00000565003 TMEM38BQ9NVV0 291 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 RIMS3Q9UJD0 308 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 CAPN7Q9Y6W3 813 aa8.65□□□□□ -1.02
CMTM3-209ENST00000565003 MALRD1Q5VYJ5 2156 aa8.65□□□□□ -1.03
CMTM3-209ENST00000565003 DHHO43323 396 aa8.64□□□□□ -1.03
CMTM3-209ENST00000565003 PIP5K1CO60331 668 aa8.64□□□□□ -1.03
CMTM3-209ENST00000565003 BCL10O95999 233 aa8.64□□□□□ -1.03
CMTM3-209ENST00000565003 IFNA14P01570 189 aa8.64□□□□□ -1.03
CMTM3-209ENST00000565003 IGHG1P01857 330 aa8.64□□□□□ -1.03
CMTM3-209ENST00000565003 ADRA2AP08913 450 aa8.64□□□□□ -1.03
CMTM3-209ENST00000565003 QDPRP09417 244 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms