RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 SBF1O95248 1867 aa4.27□□□□□ -1.73
SMG1-207ENST00000563235 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 A0A1W2PQ45 241 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 A0A1W2PQY0 241 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 CENPXA8MT69 81 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 SIGLEC5O15389 551 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RP2O75695 350 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 GLSO94925 669 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 NDUFA10O95299 355 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 CD160O95971 181 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ORM1P02763 201 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ZNF35P13682 527 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 MGMTP16455 207 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 CSNK2A2P19784 350 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 FCARP24071 287 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RPS12P25398 132 aaKnown RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 GLP1RP43220 463 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 BDKRB1P46663 353 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 DNASE1L1P49184 302 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 SRP9P49458 86 aaKnown RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 CAV2P51636 162 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 MLLT10P55197 1068 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 CLDN15P56746 228 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 PRPSAP1Q14558 356 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 TCTN1Q2MV58 587 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 FBXW9Q5XUX1 488 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ELP2Q6IA86 826 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 G2E3Q7L622 706 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 MAVSQ7Z434 540 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ATG4DQ86TL0 474 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 DCP2Q8IU60 420 aaKnown RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 FBXO16Q8IX29 292 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 SMIM20Q8N5G0 67 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 TXNDC5Q8NBS9 432 aaKnown RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 GJC3Q8NFK1 279 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 OR5AU1Q8NGC0 362 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 OR10G3Q8NGC4 313 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 FCAMRQ8WWV6 532 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RERGQ96A58 199 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 BPIFA2Q96DR5 249 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 CENPNQ96H22 339 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 GUCD1Q96NT3 240 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 PTDSS2Q9BVG9 487 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 LHPPQ9H008 270 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 OLFML3Q9NRN5 406 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 IL36GQ9NZH8 169 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 NPAP1Q9NZP6 1156 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 SEC14L4Q9UDX3 406 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RAB26Q9ULW5 256 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RAP2CQ9Y3L5 183 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 TMED3Q9Y3Q3 217 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 OR51B4Q9Y5P0 310 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 MYH7BA7E2Y1 1941 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 MAP2P11137 1827 aaKnown RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 CRB1P82279 1406 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 TMEM200CA6NKL6 621 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 LMO7DNF2Z398 122 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 F8VVB4 439 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 F8VWA3 439 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 KCNK1O00180 336 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 KHDRBS3O75525 346 aaKnown RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 ATP6AP2O75787 350 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 DIRAS1O95057 198 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 TMEM50AO95807 157 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ADH4P08319 380 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 GTF2F2P13984 249 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 UGT2B7P16662 529 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 HOXB9P17482 250 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 AKR1C4P17516 323 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 CXCR1P25024 350 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 FUT6P51993 359 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RAB10P61026 200 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 JAG1P78504 1218 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 IFITM2Q01629 132 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 DUSP2Q05923 314 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ST3GAL3Q11203 375 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ZNF77Q15935 545 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 FAM153CQ494X1 144 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RFTN2Q52LD8 501 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 ACTL10Q5JWF8 245 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 SLC35D3Q5M8T2 416 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 RBM48Q5RL73 367 aaKnown RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 TPRG1LQ5T0D9 272 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 AGAP7PQ5VUJ5 663 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 DHRS13Q6UX07 377 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 SPNS3Q6ZMD2 512 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 PQLC2Q6ZP29 291 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 COX15Q7KZN9 410 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 OR1M1Q8NGA1 313 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 CD200R1Q8TD46 325 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 PYROXD1Q8WU10 500 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 SLC38A5Q8WUX1 472 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 TESCQ96BS2 214 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 DCAF5Q96JK2 942 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ZNF488Q96MN9 340 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 AGAP4Q96P64 663 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 GPR78Q96P69 363 aa4.26□□□□□ -1.73
SMG1-207ENST00000563235 ILKAPQ9H0C8 392 aaPredicted RBP4.26□□□□□ -1.73
SMG1-207ENST00000563235 ACSS3Q9H6R3 686 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms