RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 C10orf111Q8N326 155 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 SPDL1Q96EA4 605 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 FAHD2AQ96GK7 314 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 ZNF416Q9BWM5 594 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 OR51B6Q9H340 312 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 RNF121Q9H920 327 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 TCF7L2Q9NQB0 619 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 CCDC167Q9P0B6 97 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 SLAMF8Q9P0V8 285 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 SLC7A8Q9UHI5 535 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 CORO2BQ9UQ03 480 aa11.15□□□□□ -0.62
SF3B3-202ENST00000562722 EVPLLA8MZ36 301 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 ENTPD5O75356 428 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 FARS2O95363 451 aaKnown RBP11.14□□□□□ -0.63
SF3B3-202ENST00000562722 MT-ATP6P00846 226 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 FAM157BP0CG42 384 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 GAAP10253 952 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 HOXB9P17482 250 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-202ENST00000562722 TMEM33P57088 247 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 FXNQ16595 210 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 LRIF1Q5T3J3 769 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 RGS7BPQ6MZT1 257 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-202ENST00000562722 TMEM154Q6P9G4 183 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 EPGNQ6UW88 154 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 PIWIL3Q7Z3Z3 882 aaKnown RBP11.14□□□□□ -0.63
SF3B3-202ENST00000562722 WDFY1Q8IWB7 410 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 SKA3Q8IX90 412 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 SMYD1Q8NB12 490 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 ICA1LQ8NDH6 482 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 SLC30A7Q8NEW0 376 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 BHLHE22Q8NFJ8 381 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-202ENST00000562722 OR5J2Q8NH18 312 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF418Q8TF45 676 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-202ENST00000562722 SNX33Q8WV41 574 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 YIPF5Q969M3 257 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF75AQ96N20 296 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 MCHR1Q99705 422 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 TMEM43Q9BTV4 400 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 RSPO3Q9BXY4 272 aaPredicted RBP11.14□□□□□ -0.63
SF3B3-202ENST00000562722 CDH20Q9HBT6 801 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF224Q9NZL3 707 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 TAAR3PQ9P1P4 343 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 GPR160Q9UJ42 338 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 ANGPT4Q9Y264 503 aa11.14□□□□□ -0.63
SF3B3-202ENST00000562722 A0A0A6YYJ9 748 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 M0R3H8 397 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 KPNA4O00629 521 aaPredicted RBP11.13□□□□□ -0.63
SF3B3-202ENST00000562722 WNT9BO14905 357 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 TPD52L2O43399 206 aaKnown RBP11.13□□□□□ -0.63
SF3B3-202ENST00000562722 RNF13O43567 381 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 CDC14BO60729 498 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 NCR1O76036 304 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 SERPINA5P05154 406 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 LCKP06239 509 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 CFPP27918 469 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 SLC18A1P54219 525 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 RBBP4Q09028 425 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 MELKQ14680 651 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 PAGE3Q5JUK9 113 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 SWT1Q5T5J6 900 aaKnown RBP11.13□□□□□ -0.63
SF3B3-202ENST00000562722 TMEM53Q6P2H8 277 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 BLOC1S3Q6QNY0 202 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 SLC35D2Q76EJ3 337 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 SLC22A24Q8N4F4 322 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 HIPK4Q8NE63 616 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF566Q969W8 418 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 SH3GL3Q99963 347 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 WFDC6Q9BQY6 131 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF385DQ9H6B1 395 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 TMEM38AQ9H6F2 299 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 EVA1AQ9H8M9 152 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 GLTPQ9NZD2 209 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 VAPAQ9P0L0 249 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 RAB21Q9UL25 225 aa11.13□□□□□ -0.63
SF3B3-202ENST00000562722 TRAV20A0A0B4J274 112 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 SLC22A23A1A5C7 686 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 CPSF4LA6NMK7 179 aaKnown RBP11.12□□□□□ -0.63
SF3B3-202ENST00000562722 TPST2O60704 377 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 CH25HO95992 272 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 OPN1SWP03999 348 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 HIST1H2ABP04908 130 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 OR8G3PP0DMU2 310 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 UMPSP11172 480 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 CCL2P13500 99 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 ANPEPP15144 967 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 MAGEB1P43366 347 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 KLF3P57682 345 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-202ENST00000562722 CCL8P80075 99 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 MRPS11P82912 194 aaKnown RBP11.12□□□□□ -0.63
SF3B3-202ENST00000562722 MYBPC1Q00872 1141 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 MVKQ03426 396 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 CYP51A1Q16850 503 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 TBC1D28Q2M2D7 210 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 AVPI1Q5T686 147 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 ZNF613Q6PF04 617 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 TTC33Q6PID6 262 aaPredicted RBP11.12□□□□□ -0.63
SF3B3-202ENST00000562722 DEF8Q6ZN54 512 aa11.12□□□□□ -0.63
SF3B3-202ENST00000562722 HIST3H2AQ7L7L0 130 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms