RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 C2orf16Q68DN1 1984 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 OR6C74A6NCV1 312 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 CCL16O15467 120 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 LTBRP36941 435 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 MAP3K8P41279 467 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 MEOX2P50222 304 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 LUMP51884 338 aaPredicted RBP16.98■□□□□ 0.31
BBS4-204ENST00000562084 DCDP81605 110 aaKnown RBP16.98■□□□□ 0.31
BBS4-204ENST00000562084 MAMSTRQ6ZN01 415 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 ZNF550Q7Z398 422 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 RSPRY1Q96DX4 576 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 GPX7Q96SL4 187 aaPredicted RBP16.98■□□□□ 0.31
BBS4-204ENST00000562084 FAM117AQ9C073 453 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 COMMD4Q9H0A8 199 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 DZANK1Q9NVP4 752 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 CPNE7Q9UBL6 633 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 PLEKHM1Q9Y4G2 1056 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
BBS4-204ENST00000562084 MCIDASD6RGH6 385 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 C1QTNF3-AMACRE9PGA6 284 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 UPK3AO75631 287 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 TMIGD3P0DMS9 266 aaPredicted RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 HLA-GP17693 338 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 ZNF10P21506 573 aaPredicted RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 RPL4P36578 427 aaKnown RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 UBE2MP61081 183 aaKnown RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 DHCR24Q15392 516 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 TMEM205Q6UW68 189 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 OR1J4Q8NGS1 313 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 OR6K6Q8NGW6 343 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 GPX8Q8TED1 209 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 VRK1Q99986 396 aaPredicted RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 TSPAN10Q9H1Z9 355 aaPredicted RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 SFXN1Q9H9B4 322 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 ADAP2Q9NPF8 381 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 CTSFQ9UBX1 484 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 NOTCH4Q99466 2003 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 URADA6NGE7 173 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 TMEM212A6NML5 194 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 IMPA2O14732 288 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 WNT11O96014 354 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 NGFRP08138 427 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 HNRNPA1P09651 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
BBS4-204ENST00000562084 ZNF888P0CJ79 500 aaPredicted RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 ADH5P11766 374 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 FNTBP49356 437 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 PRPS1P60891 318 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 NKAIN2Q5VXU1 208 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 C3orf33Q6P1S2 294 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 NDUFAF7Q7L592 441 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 SKA3Q8IX90 412 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 PUSL1Q8N0Z8 303 aaKnown RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 GABRG1Q8N1C3 465 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 OR4D10Q8NGI6 311 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 ZNF707Q96C28 371 aaPredicted RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 ZNF471Q9BX82 626 aaPredicted RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 CCDC86Q9H6F5 360 aaKnown RBP16.97■□□□□ 0.31
BBS4-204ENST00000562084 SYNPO2LQ9H987 977 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 ZNF337Q9Y3M9 751 aa16.97■□□□□ 0.31
BBS4-204ENST00000562084 SYNDIG1LA6NDD5 238 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 P2RX6O15547 441 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 FGF16O43320 207 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 B3GALT2O43825 422 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 LDB3O75112 727 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 MOSPD3O75425 235 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 SNAPINO95295 136 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 HEXAP06865 529 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 SLC35G6P0C7Q6 338 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 ADH7P40394 386 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 ACAA2P42765 397 aaKnown RBP16.96■□□□□ 0.31
BBS4-204ENST00000562084 NR0B1P51843 470 aaKnown RBP16.96■□□□□ 0.31
BBS4-204ENST00000562084 GPR85P60893 370 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 PLAURQ03405 335 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 ZNF528Q3MIS6 628 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 TRMT12Q53H54 448 aaKnown RBP16.96■□□□□ 0.31
BBS4-204ENST00000562084 FAM74A1Q5RGS3 127 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 LINC01590Q5TEZ4 76 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 ZNF813Q6ZN06 617 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 LDLRAD3Q86YD5 345 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 DMBX1Q8NFW5 382 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 GPR148Q8TDV2 347 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 NMNAT3Q96T66 252 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 ALG12Q9BV10 488 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 PCDHB10Q9UN67 800 aa16.96■□□□□ 0.31
BBS4-204ENST00000562084 TRAV18A0A075B6X5 111 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 NPIPA5A0A0B4J1W7 369 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 OR6C68A6NDL8 312 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 NPIPA7E9PJI5 369 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 CD3DP04234 171 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 NPIPA8P0DM63 369 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 SMIM10L1P0DMW3 83 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 APEHP13798 732 aaKnown RBP16.95■□□□□ 0.3
BBS4-204ENST00000562084 PEBP1P30086 187 aaKnown RBP16.95■□□□□ 0.3
BBS4-204ENST00000562084 UBE2IP63279 158 aaKnown RBP16.95■□□□□ 0.3
BBS4-204ENST00000562084 RASGEF1BQ0VAM2 473 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 VN1R4Q7Z5H5 301 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 SMIM10Q96HG1 83 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 PDCD10Q9BUL8 212 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 EDEM2Q9BV94 578 aa16.95■□□□□ 0.3
BBS4-204ENST00000562084 IL21RQ9HBE5 538 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms