RNA–Protein interactions for RNA: ENST00000561960.5

NSMCE1-202, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-202ENST00000561960 ZNF69Q9UC07 566 aa9.94□□□□□ -0.82
NSMCE1-202ENST00000561960 LGALS13Q9UHV8 139 aa9.94□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF232Q9UNY5 417 aa9.94□□□□□ -0.82
NSMCE1-202ENST00000561960 GPR45Q9Y5Y3 372 aa9.94□□□□□ -0.82
NSMCE1-202ENST00000561960 WNK1Q9H4A3 2382 aa9.94□□□□□ -0.82
NSMCE1-202ENST00000561960 MDFIC2A0A1B0GVS7 189 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF726A6NNF4 738 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 KPNA4O00629 521 aaPredicted RBP9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 GPANK1O95872 356 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 BGLAPP02818 100 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 AQP1P29972 269 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 MPV17P39210 176 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 CSNK1A1P48729 337 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 EVX1P49640 407 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 KLF3P57682 345 aaPredicted RBP9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 SEC61A1P61619 476 aaKnown RBP9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 MPP2Q14168 576 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 DPY19L1Q2PZI1 675 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 CEP85LQ5SZL2 805 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 C1QTNF12Q5T7M4 302 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 SLC2A7Q6PXP3 512 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 LRRC18Q8N456 261 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 BHLHE22Q8NFJ8 381 aaPredicted RBP9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 IL17RDQ8NFM7 739 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 NANPQ8TBE9 248 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 SYNPRQ8TBG9 265 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 SNX33Q8WV41 574 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 GEMIN6Q8WXD5 167 aaKnown RBP9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 DCLRE1CQ96SD1 692 aaKnown RBP9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 ZBTB18Q99592 522 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 CENPHQ9H3R5 247 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 MEAF6Q9HAF1 191 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 CDH20Q9HBT6 801 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 B3GAT2Q9NPZ5 323 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 SLC52A3Q9NQ40 469 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 DECR2Q9NUI1 292 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 SLC7A8Q9UHI5 535 aa9.93□□□□□ -0.82
NSMCE1-202ENST00000561960 DOCK11Q5JSL3 2073 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 A0A096LPI6 279 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 CLDN25C9JDP6 229 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 AKAP8O43823 692 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 UBL3O95164 117 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 ADORA3P0DMS8 318 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 HKR1P10072 659 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 MDKP21741 143 aaPredicted RBP9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 LSP1P33241 339 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 PCGF2P35227 344 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 LIMS1P48059 325 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 RPS23P62266 143 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 VSNL1P62760 191 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 PUDPQ08623 228 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 BAMBIQ13145 260 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 LEG1Q6P5S2 330 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 SHISA2Q6UWI4 295 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 CNPY4Q8N129 248 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 SLC22A24Q8N4F4 322 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 ANKRD42Q8N9B4 389 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 OR4K5Q8NGD3 323 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 DVL3Q92997 716 aaPredicted RBP9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 RAB39BQ96DA2 213 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 ASPNQ9BXN1 380 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 SAP30LQ9HAJ7 183 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 MOV10Q9HCE1 1003 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 CALML5Q9NZT1 146 aa9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF346Q9UL40 294 aaKnown RBP9.92□□□□□ -0.82
NSMCE1-202ENST00000561960 A0A0G2JPF8 293 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 HNRNPCL2B2RXH8 293 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 HNRNPCL3B7ZW38 293 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 C5orf58C9J3I9 102 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 PLPP3O14495 311 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 TPST2O60704 377 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 HNRNPCL1O60812 293 aaKnown RBP9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 SERPINA5P05154 406 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 HNRNPCL4P0DMR1 293 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 DRD4P21917 467 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 LRRC74AQ0VAA2 488 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 BST1Q10588 318 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 STX3Q13277 289 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 ARMCX4Q5H9R4 360 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 LRRC17Q8N6Y2 441 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 ANKK1Q8NFD2 765 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF385DQ9H6B1 395 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF696Q9H7X3 374 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 NPHS2Q9NP85 383 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 KCNK9Q9NPC2 374 aa9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 V9GYY5 206 aaPredicted RBP9.91□□□□□ -0.82
NSMCE1-202ENST00000561960 TMEM247A6NEH6 219 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 ZSCAN5BA6NJL1 495 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 M0R3H8 397 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 OR2T1O43869 369 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 SLC22A3O75751 556 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 FSHBP01225 129 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 IGHV1-46P01743 117 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 ANPEPP15144 967 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 PAX7P23759 505 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 CDAP32320 146 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 CRYBB2P43320 205 aa9.9□□□□□ -0.82
NSMCE1-202ENST00000561960 ZNF81P51508 661 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms