RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 RELTQ969Z4 430 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 ZC3HAV1LQ96H79 300 aaKnown RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 DERL3Q96Q80 235 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 PPP4R1LQ9P1A2 415 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 TEKT2Q9UIF3 430 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 NXT1Q9UKK6 140 aaKnown RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 IGLV1-36A0A0B4J1U3 117 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 MEIOCA2RUB1 952 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 ETV2O00321 342 aaPredicted RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 PDCD5O14737 125 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 TFECO14948 347 aaPredicted RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 LYRM1O43325 122 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 ZNF208O43345 1280 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 GDF9O60383 454 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 FBXO45P0C2W1 286 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 SNRPBP14678 240 aaKnown RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 ZNF28P17035 718 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 SRMP19623 302 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 MSX1P28360 303 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 CCKBRP32239 447 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 PTGDSP41222 190 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 RPS27P42677 84 aaKnown RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 CENPAP49450 140 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 BLVRAP53004 296 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 ZP4Q12836 540 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 MFSD13AQ14CX5 517 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 UBE2J2Q8N2K1 259 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 AGBL5Q8NDL9 886 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 OR5AK2Q8NH90 309 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 MFSD8Q8NHS3 518 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 THEM6Q8WUY1 208 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 WACQ9BTA9 647 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 RBFOX1Q9NWB1 397 aaKnown RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 FRRS1LQ9P0K9 344 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 GPN3Q9UHW5 284 aaPredicted RBP8.84□□□□□ -0.99
SMG1-205ENST00000561947 KCNG2Q9UJ96 466 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 VDAC3Q9Y277 283 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 HRH3Q9Y5N1 445 aa8.84□□□□□ -0.99
SMG1-205ENST00000561947 A0A087WV48 116 aa8.83□□□□□ -1
SMG1-205ENST00000561947 IGLV3-32A0A0A0MS00 114 aa8.83□□□□□ -1
SMG1-205ENST00000561947 A0A0B4J203 849 aa8.83□□□□□ -1
SMG1-205ENST00000561947 SLC22A23A1A5C7 686 aa8.83□□□□□ -1
SMG1-205ENST00000561947 SLC16A7O60669 478 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ITGA10O75578 1167 aa8.83□□□□□ -1
SMG1-205ENST00000561947 OR2J2O76002 312 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ZFP36L1Q07352 338 aaKnown RBP8.83□□□□□ -1
SMG1-205ENST00000561947 MELKQ14680 651 aa8.83□□□□□ -1
SMG1-205ENST00000561947 OR7A5Q15622 319 aa8.83□□□□□ -1
SMG1-205ENST00000561947 PYHIN1Q6K0P9 492 aa8.83□□□□□ -1
SMG1-205ENST00000561947 SLC23A3Q6PIS1 610 aa8.83□□□□□ -1
SMG1-205ENST00000561947 DTX3Q8N9I9 347 aa8.83□□□□□ -1
SMG1-205ENST00000561947 OR10G3Q8NGC4 313 aa8.83□□□□□ -1
SMG1-205ENST00000561947 DDIT4LQ96D03 193 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ORAI1Q96D31 301 aa8.83□□□□□ -1
SMG1-205ENST00000561947 NXPE2Q96DL1 559 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ARL5BQ96KC2 179 aa8.83□□□□□ -1
SMG1-205ENST00000561947 AMELYQ99218 206 aa8.83□□□□□ -1
SMG1-205ENST00000561947 GFI1Q99684 422 aa8.83□□□□□ -1
SMG1-205ENST00000561947 DEFB126Q9BYW3 111 aa8.83□□□□□ -1
SMG1-205ENST00000561947 HDHD2Q9H0R4 259 aa8.83□□□□□ -1
SMG1-205ENST00000561947 TSPAN10Q9H1Z9 355 aaPredicted RBP8.83□□□□□ -1
SMG1-205ENST00000561947 METTL7AQ9H8H3 244 aa8.83□□□□□ -1
SMG1-205ENST00000561947 RNF121Q9H920 327 aa8.83□□□□□ -1
SMG1-205ENST00000561947 BRD7Q9NPI1 651 aa8.83□□□□□ -1
SMG1-205ENST00000561947 RALGAPA1Q6GYQ0 2036 aa8.83□□□□□ -1
SMG1-205ENST00000561947 LOC102723996A0A087X1L8 192 aa8.83□□□□□ -1
SMG1-205ENST00000561947 TRBV5-5A0A0J9YX44 114 aa8.83□□□□□ -1
SMG1-205ENST00000561947 MS4A18H0YCH9 400 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ZNF593O00488 134 aaPredicted RBP8.83□□□□□ -1
SMG1-205ENST00000561947 CCNKO75909 580 aa8.83□□□□□ -1
SMG1-205ENST00000561947 HLA-DQA2P01906 255 aa8.83□□□□□ -1
SMG1-205ENST00000561947 CTLA4P16410 223 aa8.83□□□□□ -1
SMG1-205ENST00000561947 MAGEB1P43366 347 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ZNF41P51814 821 aaPredicted RBP8.83□□□□□ -1
SMG1-205ENST00000561947 PUDPQ08623 228 aa8.83□□□□□ -1
SMG1-205ENST00000561947 PCOLCEQ15113 449 aa8.83□□□□□ -1
SMG1-205ENST00000561947 NTRK2Q16620 822 aa8.83□□□□□ -1
SMG1-205ENST00000561947 MS4A18Q3C1V0 323 aa8.83□□□□□ -1
SMG1-205ENST00000561947 Q499Y3 187 aa8.83□□□□□ -1
SMG1-205ENST00000561947 SLC25A53Q5H9E4 307 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ZNF57Q68EA5 555 aaPredicted RBP8.83□□□□□ -1
SMG1-205ENST00000561947 LRRC69Q6ZNQ3 347 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ZNF248Q8NDW4 579 aa8.83□□□□□ -1
SMG1-205ENST00000561947 OR2G2Q8NGZ5 317 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ELP5Q8TE02 316 aa8.83□□□□□ -1
SMG1-205ENST00000561947 NSMAFQ92636 917 aa8.83□□□□□ -1
SMG1-205ENST00000561947 TRIM63Q969Q1 353 aa8.83□□□□□ -1
SMG1-205ENST00000561947 RFT1Q96AA3 541 aa8.83□□□□□ -1
SMG1-205ENST00000561947 GTPBP2Q9BX10 602 aaKnown RBP8.83□□□□□ -1
SMG1-205ENST00000561947 SLC25A18Q9H1K4 315 aa8.83□□□□□ -1
SMG1-205ENST00000561947 SDHAF3Q9NRP4 125 aa8.83□□□□□ -1
SMG1-205ENST00000561947 MRPL22Q9NWU5 206 aaKnown RBP8.83□□□□□ -1
SMG1-205ENST00000561947 SLCO1C1Q9NYB5 712 aa8.83□□□□□ -1
SMG1-205ENST00000561947 ING1Q9UK53 422 aaPredicted RBP8.83□□□□□ -1
SMG1-205ENST00000561947 SPATA2Q9UM82 520 aa8.83□□□□□ -1
SMG1-205ENST00000561947 WIF1Q9Y5W5 379 aa8.83□□□□□ -1
SMG1-205ENST00000561947 A0A1B0GTH9 108 aa8.82□□□□□ -1
SMG1-205ENST00000561947 A0A1B0GVC2 190 aa8.82□□□□□ -1
SMG1-205ENST00000561947 A6NIN4 97 aa8.82□□□□□ -1
SMG1-205ENST00000561947 A6NIZ1 184 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms