RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 SEC61A2Q9H9S3 476 aa13.46□□□□□ -0.25
CCDC113-203ENST00000561517 ZFHX3Q15911 3703 aa13.46□□□□□ -0.25
CCDC113-203ENST00000561517 YLPM1P49750 1951 aaKnown RBP13.45□□□□□ -0.26
CCDC113-203ENST00000561517 TRIM64A6NGJ6 449 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 TRIM64BA6NI03 449 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 NPIPB13A6NJU9 1138 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 CENPBD1B2RD01 187 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 NPIPB4C9JG80 1138 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 PIP5K1CO60331 668 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 NDUFS7O75251 213 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 DCTN3O75935 186 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 IGHV4-39P01824 125 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 F13BP05160 661 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 PGA4P0DJD7 388 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 PGA3P0DJD8 388 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 AQP2P41181 271 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC113-203ENST00000561517 TRAM2Q15035 370 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 FXNQ16595 210 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 HIST3H3Q16695 136 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 GLYATQ6IB77 296 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 MDP1Q86V88 176 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 MYPOPQ86VE0 399 aaPredicted RBP13.45□□□□□ -0.26
CCDC113-203ENST00000561517 ANKS4BQ8N8V4 417 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 BPIFA2Q96DR5 249 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 ZNF75AQ96N20 296 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 SEPHS2Q99611 448 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 KCNS3Q9BQ31 491 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 CACNG6Q9BXT2 260 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 MRPL13Q9BYD1 178 aaKnown RBP13.45□□□□□ -0.26
CCDC113-203ENST00000561517 INIPQ9NRY2 104 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 ARL8BQ9NVJ2 186 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 ADA2Q9NZK5 511 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 ZNF224Q9NZL3 707 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 RHCGQ9UBD6 479 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 EGFL7Q9UHF1 273 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 TAGLN3Q9UI15 199 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 RPS6KA6Q9UK32 745 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 HIF3AQ9Y2N7 669 aa13.45□□□□□ -0.26
CCDC113-203ENST00000561517 NIPBLQ6KC79 2804 aaeCLIP13.45□□□□□ -0.26
CCDC113-203ENST00000561517 HIVEP2P31629 2446 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 FN1P02751 2386 aaKnown RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 A0A1W2PRG6 482 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 IGHG1P01857 330 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 CELA3BP08861 270 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 IFI30P13284 250 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 HSD17B1P14061 328 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 B4GALT1P15291 398 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 CALCRP30988 508 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 IDH3GP51553 393 aaPredicted RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 CLEC12BQ2HXU8 276 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 DNM1P46Q6ZS02 220 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 PIWIL3Q7Z3Z3 882 aaKnown RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 HDDC2Q7Z4H3 204 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 RNF113BQ8IZP6 322 aaKnown RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 PGAM4Q8N0Y7 254 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 OR4F15Q8NGB8 312 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 MOSPD2Q8NHP6 518 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 ASB10Q8WXI3 467 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 ACOT11Q8WXI4 607 aaPredicted RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 SMR3AQ99954 134 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 ANKRD19PQ9H560 264 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 DENND2DQ9H6A0 471 aaPredicted RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 GORASP2Q9H8Y8 452 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 BARX1Q9HBU1 254 aaPredicted RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 DCAF13Q9NV06 445 aaKnown RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 GDF2Q9UK05 429 aaPredicted RBP13.44□□□□□ -0.26
CCDC113-203ENST00000561517 ENPP4Q9Y6X5 453 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 NF1P21359 2839 aa13.44□□□□□ -0.26
CCDC113-203ENST00000561517 A0A087WUU8 490 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 IGHV2OR16-5A0A0B4J2B6 119 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 H7C417 338 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 DHHO43323 396 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 PDE5AO76074 875 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 HLA-HP01893 362 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 MAKP20794 623 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 CAPZA2P47755 286 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 DAP3P51398 398 aaKnown RBP13.43□□□□□ -0.26
CCDC113-203ENST00000561517 ZNF133P52736 654 aaPredicted RBP13.43□□□□□ -0.26
CCDC113-203ENST00000561517 HGFACQ04756 655 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 PRKCDQ05655 676 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 RUNX1T1Q06455 604 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 NPRL3Q12980 569 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 TNK1Q13470 666 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 LAPTM4AQ15012 233 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 SWI5Q1ZZU3 235 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 GSG1Q2KHT4 349 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 MST1LQ2TV78 715 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 ARMC4Q5T2S8 1044 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 NRMQ8IXM6 262 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 RNF148Q8N7C7 305 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 RBM15BQ8NDT2 890 aaKnown RBP13.43□□□□□ -0.26
CCDC113-203ENST00000561517 NUP37Q8NFH4 326 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 IL17RDQ8NFM7 739 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 NANOS1Q8WY41 292 aaKnown RBP13.43□□□□□ -0.26
CCDC113-203ENST00000561517 C7orf34Q96L11 122 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 TXNIPQ9H3M7 391 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 NOX3Q9HBY0 568 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 CA10Q9NS85 328 aa13.43□□□□□ -0.26
CCDC113-203ENST00000561517 STX18Q9P2W9 335 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms