RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 TMEM54Q969K7 222 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 ASB9Q96DX5 294 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 DHRS1Q96LJ7 313 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 TMEM5Q9Y2B1 443 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 POFUT2Q9Y2G5 429 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 CADP27708 2225 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 RRM2P31350 389 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 DEFB113Q30KQ7 82 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 ZNF672Q499Z4 452 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 DNAL1Q4LDG9 190 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 MTX3Q5HYI7 312 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 ZNF813Q6ZN06 617 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 SYT14Q8NB59 555 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 NOXO1Q8NFA2 376 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 MAGEE2Q8TD90 523 aaPredicted RBP17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 MBD6Q96DN6 1003 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 TNFRSF13CQ96RJ3 184 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 FOXB1Q99853 325 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 POU2F3Q9UKI9 436 aa17.4■□□□□ 0.38
TSPAN3-210ENST00000561277 ARPC4-TTLL3A0A0A6YYG9 625 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 TCRBV5S2A0A599 114 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 SHISA9B4DS77 424 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 B4GALT1P15291 398 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 SLC9A3P48764 834 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 CDH11P55287 796 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 SMIM11AP58511 58 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 CTXN1P60606 82 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 MYBPC1Q00872 1141 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 TMPRSS11FQ6ZWK6 438 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 HDDC2Q7Z4H3 204 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 ZNF611Q8N823 705 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 FBXW5Q969U6 566 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 LRGUKQ96M69 825 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 ZNF347Q96SE7 839 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 TXNIPQ9H3M7 391 aa17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 KRCC1Q9NPI7 259 aaPredicted RBP17.39■□□□□ 0.37
TSPAN3-210ENST00000561277 TRMUO75648 421 aaKnown RBP17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 STAMBPO95630 424 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 ACADSP16219 412 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 OMPP47874 163 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 FHL1Q13642 323 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 ARMC4Q5T2S8 1044 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 C1QTNF12Q5T7M4 302 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 SLC7A6OSQ96CW6 309 aaPredicted RBP17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 ALPK1Q96QP1 1244 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 FOXC2Q99958 501 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 FUZQ9BT04 418 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 MGAT4BQ9UQ53 548 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 AURKCQ9UQB9 309 aa17.38■□□□□ 0.37
TSPAN3-210ENST00000561277 IGHV1-18A0A0C4DH31 117 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 SH3PXD2BA1X283 911 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 ZNF503-AS2A6NEH8 195 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 QDPRP09417 244 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 RPL4P36578 427 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 LIMS1P48059 325 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 TESK1Q15569 626 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 ZBED5Q49AG3 693 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 LRFN4Q6PJG9 635 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 LRRC75AQ8NAA5 344 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 PIGTQ969N2 578 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 RADILQ96JH8 1075 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 SLC38A2Q96QD8 506 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 MRPL13Q9BYD1 178 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 CISD1Q9NZ45 108 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 ZNF346Q9UL40 294 aaKnown RBP17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 DSCAMO60469 2012 aa17.37■□□□□ 0.37
TSPAN3-210ENST00000561277 NPIPB13A6NJU9 1138 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 NPIPB4C9JG80 1138 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 DHHO43323 396 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 HLA-HP01893 362 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 HOXB1P14653 301 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 RPL27P61353 136 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 CD47Q08722 323 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 NPRL3Q12980 569 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 ANKDD1AQ495B1 522 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 DEPDC4Q8N2C3 294 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 HTRA1Q92743 480 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 HDAC2Q92769 488 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 MCHR2Q969V1 340 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 BTBD10Q9BSF8 475 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 KATNB1Q9BVA0 655 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 BEX4Q9NWD9 120 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 STX18Q9P2W9 335 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 MOKQ9UQ07 419 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 LAMP3Q9UQV4 416 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 ATP6V1G2-DDX39BF2Z307 99 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 ACOT8O14734 319 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 OR10H3O60404 316 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 CD79AP11912 226 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 ZNF26P17031 533 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 ACVR1BP36896 505 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 ERVK-25P63136 954 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 BNIP1Q12981 228 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 HIST3H3Q16695 136 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 PIWIL3Q7Z3Z3 882 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 MDP1Q86V88 176 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 SMAP2Q8WU79 429 aaPredicted RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 RSRC1Q96IZ7 334 aaKnown RBP17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 TSPAN32Q96QS1 320 aa17.36■□□□□ 0.37
TSPAN3-210ENST00000561277 TRIM15Q9C019 465 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms