RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CBR4Q8N4T8 237 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 ARIH2OSQ8N7S6 290 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 SYT14Q8NB59 555 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 OR52L1Q8NGH7 329 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 OR8D4Q8NGM9 314 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 OR6N1Q8NGY5 312 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 MAGEE2Q8TD90 523 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-221ENST00000561276 DNAJC9Q8WXX5 260 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 ZNF566Q969W8 418 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 EME1Q96AY2 570 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 LRRC46Q96FV0 321 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 SLC29A1Q99808 456 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 RBM4BQ9BQ04 359 aaKnown RBP9.07□□□□□ -0.96
LRRC28-221ENST00000561276 C9orf16Q9BUW7 83 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 RBM4Q9BWF3 364 aaKnown RBP9.07□□□□□ -0.96
LRRC28-221ENST00000561276 MRPL13Q9BYD1 178 aaKnown RBP9.07□□□□□ -0.96
LRRC28-221ENST00000561276 GABARAPL1Q9H0R8 117 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 TBC1D23Q9NUY8 699 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 GALNT8Q9NY28 637 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 STX18Q9P2W9 335 aaKnown RBP9.07□□□□□ -0.96
LRRC28-221ENST00000561276 NKX1-2Q9UD57 310 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-221ENST00000561276 TMEFF2Q9UIK5 374 aaPredicted RBP9.07□□□□□ -0.96
LRRC28-221ENST00000561276 HIVEP3Q5T1R4 2406 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 TENM4Q6N022 2769 aa9.07□□□□□ -0.96
LRRC28-221ENST00000561276 NBASA2RRP1 2371 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 TEX13CA0A0J9YWL9 993 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 A6NIZ1 184 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 BHLHE40O14503 412 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 SOCS2O14508 198 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 XKRYO14609 159 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 EI24O14681 340 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 IMPA2O14732 288 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 ARPC3O15145 178 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 IDH3BO43837 385 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 MGRN1O60291 552 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 IGHG1P01857 330 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 APEHP13798 732 aaKnown RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 IGHV1-2P23083 117 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 GRNP28799 593 aaKnown RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 NOS3P29474 1203 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 CLRN1P58418 232 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 RAP1BP61224 184 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 ESRRGP62508 458 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 RAP1AP62834 184 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 CDK5Q00535 292 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 MYBPC1Q00872 1141 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 ITGADQ13349 1161 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 GINS1Q14691 196 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 P2RY6Q15077 328 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 PTGES3Q15185 160 aaKnown RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 HIST3H3Q16695 136 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 LRRC36Q1X8D7 754 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 MESTQ5EB52 335 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 SLC35F1Q5T1Q4 408 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 SFRP5Q5T4F7 317 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 C9orf135Q5VTT2 229 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 LPCAT4Q643R3 524 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 GPR139Q6DWJ6 353 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 ACSM5Q6NUN0 579 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 LRFN4Q6PJG9 635 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 STAC2Q6ZMT1 411 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 LINGO2Q7L985 606 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 ABHD12BQ7Z5M8 362 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 LNX2Q8N448 690 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 ZNF519Q8TB69 540 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 TEX47Q8TBZ9 253 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 HDAC2Q92769 488 aaKnown RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 RNASE6Q93091 150 aaKnown RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 TMEM54Q969K7 222 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 RASD2Q96D21 266 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 ZNF570Q96NI8 536 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 RBP7Q96R05 134 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 HDHD5Q9BXW7 423 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 CRLF2Q9HC73 371 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 GPR35Q9HC97 309 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 B3GAT2Q9NPZ5 323 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 GLTPQ9NZD2 209 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 MALT1Q9UDY8 824 aa9.06□□□□□ -0.96
LRRC28-221ENST00000561276 FOXD3Q9UJU5 478 aaPredicted RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 RRP15Q9Y3B9 282 aaKnown RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 DIDO1Q9BTC0 2240 aaKnown RBP9.06□□□□□ -0.96
LRRC28-221ENST00000561276 CENPBD1B2RD01 187 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 ZNF587BE7ETH6 402 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 C16orf97H3BN30 126 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 RPL36A-HNRNPH2H7BZ11 118 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 LYZL6O75951 148 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 CLDN1O95832 211 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 TXNDC12O95881 172 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 ALPLP05186 524 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 QDPRP09417 244 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 HIST1H1CP16403 213 aaKnown RBP9.05□□□□□ -0.96
LRRC28-221ENST00000561276 CDH2P19022 906 aaPredicted RBP9.05□□□□□ -0.96
LRRC28-221ENST00000561276 IGFBP5P24593 272 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 MPGP29372 298 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 POLR2IP36954 125 aaKnown RBP9.05□□□□□ -0.96
LRRC28-221ENST00000561276 CDKN2AP42771 156 aaKnown RBP9.05□□□□□ -0.96
LRRC28-221ENST00000561276 CSNK1A1P48729 337 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 ALDH3A2P51648 485 aa9.05□□□□□ -0.96
LRRC28-221ENST00000561276 ROR2Q01974 943 aaKnown RBP9.05□□□□□ -0.96
LRRC28-221ENST00000561276 SLC34A1Q06495 639 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms