RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 B9A039 149 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 BLOC1S5-TXNDC5H3BN57 136 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 SLC22A2O15244 555 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 CD5LO43866 347 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 PIP5K1CO60331 668 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 IFNA14P01570 189 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 MT-ND1P03886 318 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 HIST1H2ABP04908 130 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 CSF3P09919 207 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 KDELR2P33947 212 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 THBS4P35443 961 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 PTDSS1P48651 473 aaKnown RBP14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 RPL18Q07020 188 aaKnown RBP14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 EFNB3Q15768 340 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 KRT80Q6KB66 452 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 HIST3H2AQ7L7L0 130 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 HIST1H2ACQ93077 130 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF566Q969W8 418 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF442Q9H7R0 627 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 GLTPQ9NZD2 209 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 RIMS3Q9UJD0 308 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 ATRQ13535 2644 aa14.89□□□□□ -0.03
CDC42BPB-208ENST00000561271 ELOVL7A1L3X0 281 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 hCG_2039718K7EN88 272 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 OR7A10O76100 309 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 PGA4P0DJD7 388 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 PGA3P0DJD8 388 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 COX4I1P13073 169 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 SLC25A16P16260 332 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 RBM34P42696 430 aaKnown RBP14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 GIPRP48546 466 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 DAG1Q14118 895 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 SVOPLQ8N434 492 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 TMEM239Q8WW34 195 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 SGTBQ96EQ0 304 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 SLC25A44Q96H78 314 aaPredicted RBP14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF75AQ96N20 296 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 POLR2J2Q9GZM3 115 aaKnown RBP14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 POLR2J3Q9H1A7 115 aaKnown RBP14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 PLK3Q9H4B4 646 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 YAE1D1Q9NRH1 226 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 ADAM21Q9UKJ8 722 aa14.88□□□□□ -0.03
CDC42BPB-208ENST00000561271 TANC2Q9HCD6 1990 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 NME4O00746 187 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 RAB36O95755 333 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 F12P00748 615 aaPredicted RBP14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 F13BP05160 661 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 PATE4P0C8F1 98 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF14P17017 642 aaPredicted RBP14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 NPR2P20594 1047 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 FUT4P22083 530 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 PPOXP50336 477 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 CARTPTQ16568 116 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 TMEM249Q2WGJ8 235 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 LRFN4Q6PJG9 635 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 SPATA21Q7Z572 469 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 ARPINQ7Z6K5 226 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 VTCN1Q7Z7D3 282 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 TREML1Q86YW5 311 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 SKA3Q8IX90 412 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 SLC15A3Q8IY34 581 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 NOXO1Q8NFA2 376 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 RP9Q8TA86 221 aaKnown RBP14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 FGFBP3Q8TAT2 258 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 PRRC1Q96M27 445 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 TMEM38BQ9NVV0 291 aa14.87□□□□□ -0.03
CDC42BPB-208ENST00000561271 A0A1W2PRG6 482 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 KIAA1324LA8MWY0 1029 aaPredicted RBP14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 MCIDASD6RGH6 385 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 CRLF1O75462 422 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 UBL3O95164 117 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 BCL10O95999 233 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 IGHG1P01857 330 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 FUT1P19526 365 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 AQP2P41181 271 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 PDLIM4P50479 330 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 SLC7A2P52569 658 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 CLRN1P58418 232 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 MYBPC1Q00872 1141 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 LIPEQ05469 1076 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 RUNX1T1Q06455 604 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 LOXL1Q08397 574 aaPredicted RBP14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 CDK20Q8IZL9 346 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 SLC22A24Q8N4F4 322 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 MOSPD2Q8NHP6 518 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 ASB10Q8WXI3 467 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 TNFRSF13CQ96RJ3 184 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF347Q96SE7 839 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 A4GNTQ9UNA3 340 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 MED31Q9Y3C7 131 aa14.86□□□□□ -0.03
CDC42BPB-208ENST00000561271 DHHO43323 396 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 TLX2O43763 284 aaPredicted RBP14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 QDPRP09417 244 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 THRBP10828 461 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 ZNF16P17020 682 aaPredicted RBP14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 NR4A1P22736 598 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 YAP1P46937 504 aaKnown RBP14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 NUDT2P50583 147 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 RAB1AP62820 205 aa14.85□□□□□ -0.03
CDC42BPB-208ENST00000561271 SELENOWP63302 87 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms