RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 NIPBLQ6KC79 2804 aaeCLIP17.14■□□□□ 0.33
KNSTRN-210ENST00000560321 VPS13CQ709C8 3753 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 GMNCA6NCL1 334 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 GMNNO75496 209 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 IFNW1P05000 195 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 OR8G3PP0DMU2 310 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 COX4I1P13073 169 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 B4GALT1P15291 398 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 FUT1P19526 365 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 NPR2P20594 1047 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 PCSK6P29122 969 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 RPS23P62266 143 aaKnown RBP17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 DAG1Q14118 895 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 SWI5Q1ZZU3 235 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 CDK20Q8IZL9 346 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 POU5F2Q8N7G0 328 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 KCNN2Q9H2S1 579 aa17.13■□□□□ 0.33
KNSTRN-210ENST00000560321 NDUFS8O00217 210 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 SEC14L2O76054 403 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 OR7A10O76100 309 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 LYPD3O95274 346 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PTHP01270 115 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 HLA-HP01893 362 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 THY1P04216 161 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 OR1E2P47887 323 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PTDSS1P48651 473 aaKnown RBP17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PDLIM4P50479 330 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 CRYBA2P53672 197 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PIN1Q13526 163 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 NRN1LQ496H8 165 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PHYHD1Q5SRE7 291 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 GKAP1Q5VSY0 366 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 FKBP9P1Q75LS8 142 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 SPATA21Q7Z572 469 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 CYP4Z1Q86W10 505 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 LRRC17Q8N6Y2 441 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 OR10H5Q8NGA6 315 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 GEMIN6Q8WXD5 167 aaKnown RBP17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 TMEM54Q969K7 222 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 ZNF837Q96EG3 531 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PRRC1Q96M27 445 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PRSS27Q9BQR3 290 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 FNDC11Q9BVV2 318 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 NDEL1Q9GZM8 345 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 C1orf198Q9H425 327 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 INIPQ9NRY2 104 aa17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 NSD1Q96L73 2696 aaPredicted RBP17.12■□□□□ 0.33
KNSTRN-210ENST00000560321 PPOXP50336 477 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 NUDT2P50583 147 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 RAB1AP62820 205 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 LIPEQ05469 1076 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 PIGFQ07326 219 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 TAF11Q15544 211 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 ADIPOQQ15848 244 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 SLC36A2Q495M3 483 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 TMEM53Q6P2H8 277 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 HACD2Q6Y1H2 254 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 RRM2BQ7LG56 351 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 FNDC8Q8TC99 324 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 TMEM255BQ8WV15 326 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 PIMREGQ9BSJ6 248 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 PLK3Q9H4B4 646 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 DYNLRB1Q9NP97 96 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 MEPEQ9NQ76 525 aaPredicted RBP17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 CMAHPQ9Y471 501 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 RTTNQ86VV8 2226 aa17.11■□□□□ 0.33
KNSTRN-210ENST00000560321 YLPM1P49750 1951 aaKnown RBP17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 IGHV2OR16-5A0A0B4J2B6 119 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 SLC22A23A1A5C7 686 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 CXCR6O00574 342 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 DHHO43323 396 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 ZNF682O95780 498 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 TNFRSF1BP20333 461 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 CALCRP30988 508 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 GUCA1AP43080 201 aaPredicted RBP17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 RPL18Q07020 188 aaKnown RBP17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 SNTB2Q13425 540 aaKnown RBP17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 ANKDD1AQ495B1 522 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 IFI44LQ53G44 452 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 NHLRC1Q6VVB1 395 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 CPLX4Q7Z7G2 160 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 NKAIN4Q8IVV8 208 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 SLC15A3Q8IY34 581 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 SLC22A24Q8N4F4 322 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 ZNF525Q8N782 197 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 LIPHQ8WWY8 451 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 LRMDAQ9H2I8 198 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 RNF121Q9H920 327 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 B3GNT2Q9NY97 397 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 RPS6KA6Q9UK32 745 aa17.1■□□□□ 0.33
KNSTRN-210ENST00000560321 NPIPB13A6NJU9 1138 aa17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 NPIPB4C9JG80 1138 aa17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 INAFM1C9JVW0 142 aa17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 hCG_2039718K7EN88 272 aa17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 CD5LO43866 347 aa17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 SHOX2O60902 331 aaPredicted RBP17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 CELA3BP08861 270 aa17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 QDPRP09417 244 aa17.09■□□□□ 0.33
KNSTRN-210ENST00000560321 PGA4P0DJD7 388 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms