RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 PCGF2P35227 344 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 RAB1AP62820 205 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF154Q13106 437 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 RAB39AQ14964 217 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 HFEQ30201 348 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 C16orf87Q6PH81 154 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 C17orf107Q6ZR85 190 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 SPATC1Q76KD6 591 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF627Q7L945 461 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 HOMEZQ8IX15 550 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 C20orf196Q8IYI0 205 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 ZNF440Q8IYI8 595 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 KIR3DL3Q8N743 410 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 GLB1L3Q8NCI6 653 aaPredicted RBP10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 STK35Q8TDR2 534 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 SNX33Q8WV41 574 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 TIMD4Q96H15 378 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 EBF4Q9BQW3 602 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 GPR160Q9UJ42 338 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 AUP1Q9Y679 476 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 USH1CQ9Y6N9 552 aa10.85□□□□□ -0.67
RABGGTA-213ENST00000560127 A0A096LPI6 279 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 TRAPPC2LH3BP13 241 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 FZD7O75084 574 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 FOXH1O75593 365 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 AHSA1O95433 338 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 CPSF4O95639 269 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 RAB36O95755 333 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 DBIP07108 87 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 FAM157BP0CG42 384 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 RPS5P46782 204 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 NME5P56597 212 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 KLF3P57682 345 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 ERVS71-1P61550 626 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 UFM1P61960 85 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 EGR4Q05215 589 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 C1DQ13901 141 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 GNA13Q14344 377 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 MFSD13AQ14CX5 517 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 SPANXN4Q5MJ08 99 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 CARD17Q5XLA6 110 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 EPGNQ6UW88 154 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 LRRC74BQ6ZQY2 392 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 PAQR4Q8N4S7 273 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 OR8J2Q8NGG1 315 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 SYNPRQ8TBG9 265 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 TESCQ96BS2 214 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 KTI12Q96EK9 354 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 DPY30Q9C005 99 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 DENND2DQ9H6A0 471 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 MTHFD2LQ9H903 347 aaPredicted RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 SAP30LQ9HAJ7 183 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 DECR2Q9NUI1 292 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 UBAP1Q9NZ09 502 aa10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 TESQ9UGI8 421 aaKnown RBP10.84□□□□□ -0.67
RABGGTA-213ENST00000560127 A0A1B0GUS0 222 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 ISPDA4D126 451 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 TPD52L2O43399 206 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 GPANK1O95872 356 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 SERPINA5P05154 406 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 PATE4P0C8F1 98 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 PRG2P13727 222 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 ZNF12P17014 697 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 MAKP20794 623 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 SELENOVP59797 346 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 KRTAP10-3P60369 221 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 COPZ1P61923 177 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 MAD2L1Q13257 205 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 TSTQ16762 297 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 ASPHD2Q6ICH7 369 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 BRICD5Q6PL45 260 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 ZNF836Q6ZNA1 936 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 JAZF1Q86VZ6 243 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 RNF130Q86XS8 419 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 KIRREL3Q8IZU9 778 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 BHLHE22Q8NFJ8 381 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 OR9I1Q8NGQ6 314 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 FGFBP3Q8TAT2 258 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 LRRC8CQ8TDW0 803 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 ST7LQ8TDW4 575 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 CCL17Q92583 94 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 ELMOD3Q96FG2 381 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 RBM4BQ9BQ04 359 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 SLC35A5Q9BS91 424 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 EMC6Q9BV81 110 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 MS4A7Q9GZW8 240 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 OR51B6Q9H340 312 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 BEX1Q9HBH7 125 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 INTS9Q9NV88 658 aaKnown RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 SLCO1C1Q9NYB5 712 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 PRDM4Q9UKN5 801 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 POFUT2Q9Y2G5 429 aa10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 POLR3KQ9Y2Y1 108 aaPredicted RBP10.83□□□□□ -0.68
RABGGTA-213ENST00000560127 LOC102725191A0A1B0GVB3 256 aa10.82□□□□□ -0.68
RABGGTA-213ENST00000560127 PRSS51A0A1B0GVH4 220 aa10.82□□□□□ -0.68
RABGGTA-213ENST00000560127 SLC22A23A1A5C7 686 aa10.82□□□□□ -0.68
RABGGTA-213ENST00000560127 TRPC5OSA6NMA1 111 aa10.82□□□□□ -0.68
RABGGTA-213ENST00000560127 M0R082 166 aa10.82□□□□□ -0.68
RABGGTA-213ENST00000560127 AIM2O14862 343 aa10.82□□□□□ -0.68
RABGGTA-213ENST00000560127 TIMM23O14925 209 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms