RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 CD47Q08722 323 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 ITGADQ13349 1161 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 RNPS1Q15287 305 aaKnown RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 AADACL4Q5VUY2 407 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 GPR139Q6DWJ6 353 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 CHMP1BQ7LBR1 199 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 C20orf196Q8IYI0 205 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 OR52L1Q8NGH7 329 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 OR52E2Q8NGJ4 325 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 CYGBQ8WWM9 190 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 TMEM54Q969K7 222 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 ZHX1-C8orf76Q96EF9 292 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 GMPPAQ96IJ6 420 aaPredicted RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 NMNAT3Q96T66 252 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 VCXQ9H320 206 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 TP63Q9H3D4 680 aaPredicted RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 GP6Q9HCN6 339 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 HINT3Q9NQE9 182 aaKnown RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 VSX1Q9NZR4 365 aaPredicted RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 KLHL9Q9P2J3 617 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 ENOPH1Q9UHY7 261 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 RALYQ9UKM9 306 aaKnown RBP8.3□□□□□ -1.08
HERC1-206ENST00000559996 GPR52Q9Y2T5 361 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 ORC6Q9Y5N6 252 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 GMPPBQ9Y5P6 360 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 RELNP78509 3460 aa8.3□□□□□ -1.08
HERC1-206ENST00000559996 A0A1W2PRG6 482 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 SLC22A23A1A5C7 686 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 PRSS37A4D1T9 235 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 FAM183AA6NL82 134 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 FIGNL2A6NMB9 653 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 H7C1C5 153 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 PRRG2O14669 202 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 ARHGEF9O43307 516 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TLX2O43763 284 aaPredicted RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 UPK3AO75631 287 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 HMGN1P05114 100 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 SCG5P05408 212 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 CLUP10909 449 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 AGTR1P30556 359 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 CA7P43166 264 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 PCYT1AP49585 367 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 FOXG1P55316 489 aaPredicted RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 LCN6P62502 163 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TLE1Q04724 770 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 CDK5R2Q13319 367 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TOP3AQ13472 1001 aaPredicted RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 CAMK2DQ13557 499 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 KRR1Q13601 381 aaKnown RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 CRMP1Q14194 572 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 MAD2L1BPQ15013 274 aaPredicted RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 ETFDHQ16134 617 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 SNAPC1Q16533 368 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 OCLNQ16625 522 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TMEM201Q5SNT2 666 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 LINC01590Q5TEZ4 76 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 EEF1A1P5Q5VTE0 462 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 GTF2IRD2BQ6EKJ0 949 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 VWA1Q6PCB0 445 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 SLC25A47Q6Q0C1 308 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 FAM214BQ7L5A3 538 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 BTLAQ7Z6A9 289 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 GTF2IRD2Q86UP8 949 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 CPOQ8IVL8 374 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 OR6V1Q8N148 313 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TCEANCQ8N8B7 351 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 CYB561A3Q8NBI2 242 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 ZNF555Q8NEP9 628 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 SDR9C7Q8NEX9 313 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 BBS1Q8NFJ9 593 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 PRR7Q8TB68 274 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 FAM81AQ8TBF8 368 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TMEM163Q8TC26 289 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TRUB1Q8WWH5 349 aaKnown RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 INTS12Q96CB8 462 aaKnown RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 STARD4Q96DR4 205 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 ZNF837Q96EG3 531 aaPredicted RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 SLC25A44Q96H78 314 aaPredicted RBP8.29□□□□□ -1.08
HERC1-206ENST00000559996 LRR1Q96L50 414 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 TSSK2Q96PF2 358 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 SNX18Q96RF0 628 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 IL4I1Q96RQ9 567 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 PRRG4Q9BZD6 226 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 FN3KQ9H479 309 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 MED20Q9H944 212 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 PLSCR4Q9NRQ2 329 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 GLRX2Q9NS18 164 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 GRHPRQ9UBQ7 328 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 RCE1Q9Y256 329 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 MEMO1Q9Y316 297 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 ZFYVE26Q68DK2 2539 aa8.29□□□□□ -1.08
HERC1-206ENST00000559996 INTS1Q8N201 2190 aaKnown RBP8.28□□□□□ -1.08
HERC1-206ENST00000559996 A0A0G2JNJ9 132 aa8.28□□□□□ -1.08
HERC1-206ENST00000559996 CCDC182A6NF36 153 aa8.28□□□□□ -1.08
HERC1-206ENST00000559996 CENPBD1B2RD01 187 aa8.28□□□□□ -1.08
HERC1-206ENST00000559996 E9PLN8 166 aa8.28□□□□□ -1.08
HERC1-206ENST00000559996 GPR171O14626 319 aa8.28□□□□□ -1.08
HERC1-206ENST00000559996 ADRA2AP08913 450 aa8.28□□□□□ -1.08
HERC1-206ENST00000559996 CTLA4P16410 223 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms