RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 OR1Q1Q15612 314 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 NKPD1Q17RQ9 610 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 MSMPQ1L6U9 139 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SWT1Q5T5J6 900 aaKnown RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 RGS7BPQ6MZT1 257 aaPredicted RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 ACSM5Q6NUN0 579 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 TMEM154Q6P9G4 183 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SLC2A7Q6PXP3 512 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 NHLRC1Q6VVB1 395 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 RANBP3LQ86VV4 465 aaPredicted RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 C3orf56Q8N813 242 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 OR9I1Q8NGQ6 314 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 OR1J2Q8NGS2 313 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 OR5J2Q8NH18 312 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 OR6X1Q8NH79 312 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SGMS2Q8NHU3 365 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 NFKBIDQ8NI38 313 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SNX33Q8WV41 574 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 C11orf40Q8WZ69 217 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 TMEM43Q9BTV4 400 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 NARFLQ9H6Q4 476 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 LPAR2Q9HBW0 351 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SLC52A3Q9NQ40 469 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 HINT3Q9NQE9 182 aaKnown RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF275Q9NSD4 429 aaPredicted RBP7.87□□□□□ -1.15
HDDC3-204ENST00000559834 SLCO1C1Q9NYB5 712 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 PCDHB10Q9UN67 800 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 CORO2BQ9UQ03 480 aa7.87□□□□□ -1.15
HDDC3-204ENST00000559834 A0A0B4J2E0 115 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 A0A1B0GX12 115 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 C17orf100A8MU93 164 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 EVPLLA8MZ36 301 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 FAM157AC9JC47 383 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 MGRN1O60291 552 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 SERPINI2O75830 405 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 PNPP00491 289 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 MT-ND5P03915 603 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 HIST1H2ABP04908 130 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 NAT2P11245 290 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 COMPP49747 757 aaPredicted RBP7.86□□□□□ -1.15
HDDC3-204ENST00000559834 BIDP55957 195 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 LMO4P61968 165 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 PLP2Q04941 152 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 MAD2L1BPQ15013 274 aaPredicted RBP7.86□□□□□ -1.15
HDDC3-204ENST00000559834 PCGF3Q3KNV8 242 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 LRIF1Q5T3J3 769 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 TMEM53Q6P2H8 277 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF613Q6PF04 617 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 USP43Q70EL4 1123 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 HIST3H2AQ7L7L0 130 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 LRP11Q86VZ4 500 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 CARM1Q86X55 608 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 ARMC8Q8IUR7 673 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 SKA3Q8IX90 412 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 SLC22A24Q8N4F4 322 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 SEMA6DQ8NFY4 1073 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 SYNPRQ8TBG9 265 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 FAM216AQ8WUB2 273 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 HIST1H2ACQ93077 130 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF566Q969W8 418 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 RAB39BQ96DA2 213 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 MOGAT1Q96PD6 335 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 OR52B2Q96RD2 323 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 RBM4Q9BWF3 364 aaKnown RBP7.86□□□□□ -1.15
HDDC3-204ENST00000559834 C1orf198Q9H425 327 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 TMEM38AQ9H6F2 299 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 RNF121Q9H920 327 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 CDH20Q9HBT6 801 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 NKIRAS2Q9NYR9 191 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 GLTPQ9NZD2 209 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 ZNF224Q9NZL3 707 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 TAAR3PQ9P1P4 343 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 FZR1Q9UM11 496 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 GMEB1Q9Y692 573 aa7.86□□□□□ -1.15
HDDC3-204ENST00000559834 IQCMA0A1B0GVH7 501 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 TMEM89A2RUT3 159 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 C11orf98E9PRG8 122 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 DHHO43323 396 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 TPD52L2O43399 206 aaKnown RBP7.85□□□□□ -1.15
HDDC3-204ENST00000559834 FMO6PO60774 539 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 BCL10O95999 233 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 LCKP06239 509 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 GPX2P18283 190 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 CRYBB2P43320 205 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 LIMS1P48059 325 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 MRPL19P49406 292 aaKnown RBP7.85□□□□□ -1.15
HDDC3-204ENST00000559834 CDH12P55289 794 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 KLF3P57682 345 aaPredicted RBP7.85□□□□□ -1.15
HDDC3-204ENST00000559834 HILS1P60008 231 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 CCL8P80075 99 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 RBBP4Q09028 425 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 ZP4Q12836 540 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 SCARB2Q14108 478 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 SLC36A2Q495M3 483 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 TTC33Q6PID6 262 aaPredicted RBP7.85□□□□□ -1.15
HDDC3-204ENST00000559834 BLOC1S3Q6QNY0 202 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 EPGNQ6UW88 154 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 SLC35D2Q76EJ3 337 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 MAVSQ7Z434 540 aa7.85□□□□□ -1.15
HDDC3-204ENST00000559834 PEG10Q86TG7 708 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms