RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 CHI3L1P36222 383 aaPredicted RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 SERPINF1P36955 418 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 GDNFP39905 211 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 GZMKP49863 264 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 PDLIM4P50479 330 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 STX1BP61266 288 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 NAAAQ02083 359 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 TGFBR3Q03167 851 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 CHRNB3Q05901 458 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 C3orf36Q3SXR2 165 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 GTDC1Q4AE62 458 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 RPS26P11Q5JNZ5 115 aaPredicted RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 PHYHD1Q5SRE7 291 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 C1orf140Q5VVS0 124 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 FAM166AQ6J272 317 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 SPATA19Q7Z5L4 167 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 SERPINA11Q86U17 422 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 KDM8Q8N371 416 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 POMGNT2Q8NAT1 580 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 MAGEE2Q8TD90 523 aaPredicted RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 SLC38A5Q8WUX1 472 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 POP5Q969H6 163 aaKnown RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 VPS33AQ96AX1 596 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 C3orf49Q96BT1 292 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 DDIT4LQ96D03 193 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 ASB9Q96DX5 294 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 DUS3LQ96G46 650 aaKnown RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 ZNF75AQ96N20 296 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 ALKBH3Q96Q83 286 aaPredicted RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 OR52B2Q96RD2 323 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 PANX1Q96RD7 426 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 DOK1Q99704 481 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 HOPXQ9BPY8 73 aaPredicted RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 NAA11Q9BSU3 229 aaPredicted RBP5.01□□□□□ -1.61
USP3-215ENST00000559771 KATNB1Q9BVA0 655 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 LINC00470Q9BZP3 86 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 FAM192AQ9GZU8 254 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 MUC13Q9H3R2 512 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 PIF1Q9H611 641 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 NOX3Q9HBY0 568 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 OBP2BQ9NPH6 170 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 NDUFAF1Q9Y375 327 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 PMF1-BGLAPU3KQ54 211 aa5.01□□□□□ -1.61
USP3-215ENST00000559771 MEGF8Q7Z7M0 2845 aa5□□□□□ -1.61
USP3-215ENST00000559771 IGKV1D-42A0A075B6H8 117 aa5□□□□□ -1.61
USP3-215ENST00000559771 A8MVM7 634 aa5□□□□□ -1.61
USP3-215ENST00000559771 B9A039 149 aa5□□□□□ -1.61
USP3-215ENST00000559771 LYNX1G3V0Z9 82 aa5□□□□□ -1.61
USP3-215ENST00000559771 RPL36A-HNRNPH2H7BZ11 118 aa5□□□□□ -1.61
USP3-215ENST00000559771 AIM2O14862 343 aa5□□□□□ -1.61
USP3-215ENST00000559771 PDE5AO76074 875 aa5□□□□□ -1.61
USP3-215ENST00000559771 TGFAP01135 160 aa5□□□□□ -1.61
USP3-215ENST00000559771 LYNX1P0DP58 116 aa5□□□□□ -1.61
USP3-215ENST00000559771 PNMTP11086 282 aa5□□□□□ -1.61
USP3-215ENST00000559771 APEHP13798 732 aaKnown RBP5□□□□□ -1.61
USP3-215ENST00000559771 IDO1P14902 403 aa5□□□□□ -1.61
USP3-215ENST00000559771 IL7RP16871 459 aa5□□□□□ -1.61
USP3-215ENST00000559771 CXCR1P25024 350 aa5□□□□□ -1.61
USP3-215ENST00000559771 THBS4P35443 961 aa5□□□□□ -1.61
USP3-215ENST00000559771 PPOXP50336 477 aa5□□□□□ -1.61
USP3-215ENST00000559771 NUDT2P50583 147 aa5□□□□□ -1.61
USP3-215ENST00000559771 IDH3GP51553 393 aaPredicted RBP5□□□□□ -1.61
USP3-215ENST00000559771 HPCAP84074 193 aa5□□□□□ -1.61
USP3-215ENST00000559771 ARF1P84077 181 aaKnown RBP5□□□□□ -1.61
USP3-215ENST00000559771 HOXC5Q00444 222 aa5□□□□□ -1.61
USP3-215ENST00000559771 ROR2Q01974 943 aaKnown RBP5□□□□□ -1.61
USP3-215ENST00000559771 RIN1Q13671 783 aa5□□□□□ -1.61
USP3-215ENST00000559771 CCNIQ14094 377 aa5□□□□□ -1.61
USP3-215ENST00000559771 FLOT2Q14254 428 aa5□□□□□ -1.61
USP3-215ENST00000559771 TRIM25Q14258 630 aaKnown RBP5□□□□□ -1.61
USP3-215ENST00000559771 TRIP10Q15642 601 aa5□□□□□ -1.61
USP3-215ENST00000559771 DPY19L1Q2PZI1 675 aa5□□□□□ -1.61
USP3-215ENST00000559771 CR1LQ2VPA4 569 aa5□□□□□ -1.61
USP3-215ENST00000559771 SAMD4BQ5PRF9 694 aaKnown RBP5□□□□□ -1.61
USP3-215ENST00000559771 RNF220Q5VTB9 566 aa5□□□□□ -1.61
USP3-215ENST00000559771 NXNQ6DKJ4 435 aa5□□□□□ -1.61
USP3-215ENST00000559771 WBP2NLQ6ICG8 309 aa5□□□□□ -1.61
USP3-215ENST00000559771 NIPAL3Q6P499 406 aa5□□□□□ -1.61
USP3-215ENST00000559771 ZNF621Q6ZSS3 439 aa5□□□□□ -1.61
USP3-215ENST00000559771 GPAT4Q86UL3 456 aa5□□□□□ -1.61
USP3-215ENST00000559771 SNX32Q86XE0 403 aa5□□□□□ -1.61
USP3-215ENST00000559771 CDK20Q8IZL9 346 aa5□□□□□ -1.61
USP3-215ENST00000559771 TMEM123Q8N131 208 aa5□□□□□ -1.61
USP3-215ENST00000559771 PQLC1Q8N2U9 271 aa5□□□□□ -1.61
USP3-215ENST00000559771 C10orf111Q8N326 155 aa5□□□□□ -1.61
USP3-215ENST00000559771 SVOPLQ8N434 492 aa5□□□□□ -1.61
USP3-215ENST00000559771 FAM169BQ8N8A8 192 aa5□□□□□ -1.61
USP3-215ENST00000559771 VPS37AQ8NEZ2 397 aa5□□□□□ -1.61
USP3-215ENST00000559771 NUP37Q8NFH4 326 aa5□□□□□ -1.61
USP3-215ENST00000559771 OR52P1PQ8NH57 321 aa5□□□□□ -1.61
USP3-215ENST00000559771 SLC26A7Q8TE54 656 aa5□□□□□ -1.61
USP3-215ENST00000559771 NRG4Q8WWG1 115 aa5□□□□□ -1.61
USP3-215ENST00000559771 KTI12Q96EK9 354 aaPredicted RBP5□□□□□ -1.61
USP3-215ENST00000559771 OR52E6Q96RD3 313 aa5□□□□□ -1.61
USP3-215ENST00000559771 VRK1Q99986 396 aaPredicted RBP5□□□□□ -1.61
USP3-215ENST00000559771 ECSITQ9BQ95 431 aa5□□□□□ -1.61
USP3-215ENST00000559771 WFDC6Q9BQY6 131 aa5□□□□□ -1.61
USP3-215ENST00000559771 PIMREGQ9BSJ6 248 aa5□□□□□ -1.61
USP3-215ENST00000559771 TRIM15Q9C019 465 aa5□□□□□ -1.61
USP3-215ENST00000559771 WDR55Q9H6Y2 383 aaPredicted RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms