RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 ZNF684Q5T5D7 378 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 RAET1LQ5VY80 246 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 TUBA3EQ6PEY2 450 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 CDC20BQ86Y33 519 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 CLEC1AQ8NC01 280 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 OR6Q1Q8NGQ2 317 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 KCNK17Q96T54 332 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 PIGQQ9BRB3 760 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 ABI3Q9P2A4 366 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 NPIPA1Q9UND3 350 aa11.37□□□□□ -0.59
USP3-213ENST00000559711 OGG1O15527 345 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 LIPCP11150 499 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 CRABP1P29762 137 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 RPS19P39019 145 aaKnown RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 CASRP41180 1078 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 NOVA1P51513 510 aaKnown RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 SOX8P57073 446 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 B3GALT5-AS1P59052 145 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 H3F3AP84243 136 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 POU3F1Q03052 451 aaPredicted RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 FOXO1Q12778 655 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 DCTN2Q13561 401 aaKnown RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 ZNF829Q3KNS6 432 aaPredicted RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 TBC1D25Q3MII6 688 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 DMKNQ6E0U4 476 aaPredicted RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 C22orf42Q6IC83 251 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 SPINK14Q6IE38 97 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 MCFD2Q8NI22 146 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 SNX33Q8WV41 574 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 PELI1Q96FA3 418 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 TXNDC15Q96J42 360 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 KCTD7Q96MP8 289 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 UTP23Q9BRU9 249 aaKnown RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 MED18Q9BUE0 208 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 TSPAN10Q9H1Z9 355 aaPredicted RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 PLGRKTQ9HBL7 147 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 ZFP64Q9NPA5 681 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 GSTK1Q9Y2Q3 226 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 TVP23AA6NH52 213 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 AQP7P3A6NL99 342 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 SULT2B1O00204 365 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 SLC16A7O60669 478 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 IL1AP01583 271 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 CD1AP06126 327 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 CTLA4P16410 223 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 SOX6P35712 828 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 OPRL1P41146 370 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 GBX2P52951 348 aaPredicted RBP11.36□□□□□ -0.59
USP3-213ENST00000559711 SIRPAP78324 504 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 CCDC58Q4VC31 144 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 TP53I3Q53FA7 332 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 TMEM91Q6ZNR0 172 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 KCTD20Q7Z5Y7 419 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 WDFY1Q8IWB7 410 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 KLHL15Q96M94 604 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 OXGR1Q96P68 337 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 INTS14Q96SY0 518 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 TMED9Q9BVK6 235 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 WDR76Q9H967 626 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 KLHL13Q9P2N7 655 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 ST6GALNAC2Q9UJ37 374 aa11.36□□□□□ -0.59
USP3-213ENST00000559711 GJE1A6NN92 205 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 CENPBD1B2RD01 187 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 ZNF814B7Z6K7 855 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 GABRPO00591 440 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 MAGEB4O15481 346 aaPredicted RBP11.35□□□□□ -0.59
USP3-213ENST00000559711 TRAF3IP2O43734 574 aaPredicted RBP11.35□□□□□ -0.59
USP3-213ENST00000559711 EIF1BO60739 113 aaKnown RBP11.35□□□□□ -0.59
USP3-213ENST00000559711 WDPCPO95876 746 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 RFPL3SP0C7P2 107 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 ALOX5APP20292 161 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 PTGS2P35354 604 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 GPR85P60893 370 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 TRAM1Q15629 374 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 PLEKHG7Q6ZR37 379 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 ASCL5Q7RTU5 278 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 UEVLDQ8IX04 471 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 GALNT16Q8N428 558 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 KCNE4Q8WWG9 221 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 S100ZQ8WXG8 99 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 PGLYRP3Q96LB9 341 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 ADAD1Q96M93 576 aaKnown RBP11.35□□□□□ -0.59
USP3-213ENST00000559711 SIGLEC12Q96PQ1 595 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 DCLRE1CQ96SD1 692 aaKnown RBP11.35□□□□□ -0.59
USP3-213ENST00000559711 FAM173AQ9BQD7 235 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 HDHD5Q9BXW7 423 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 MFRPQ9BY79 579 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 MRPL13Q9BYD1 178 aaKnown RBP11.35□□□□□ -0.59
USP3-213ENST00000559711 OR2B2Q9GZK3 357 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 RERGLQ9H628 205 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 SLC24A3Q9HC58 644 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 AKIP1Q9NQ31 210 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 MED29Q9NX70 200 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 DLL3Q9NYJ7 618 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 POLHQ9Y253 713 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 RASD1Q9Y272 281 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 TMEM14AQ9Y6G1 99 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 GVINP1Q7Z2Y8 2422 aa11.35□□□□□ -0.59
USP3-213ENST00000559711 A0A075B6Q4 140 aa11.34□□□□□ -0.59
USP3-213ENST00000559711 PINLYPA6NC86 204 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms