RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 S100PBPQ96BU1 408 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 WFIKKN1Q96NZ8 548 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 DDOQ99489 341 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 POLDIP3Q9BY77 421 aaKnown RBP9.57□□□□□ -0.88
TPM1-217ENST00000559108 LINC00470Q9BZP3 86 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 YY1AP1Q9H869 796 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 NOX3Q9HBY0 568 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 IL20Q9NYY1 176 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 ZNF224Q9NZL3 707 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 CRIM1Q9NZV1 1036 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 MGAT4BQ9UQ53 548 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 IER3IP1Q9Y5U9 82 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 CDH10Q9Y6N8 788 aa9.57□□□□□ -0.88
TPM1-217ENST00000559108 TEX13CA0A0J9YWL9 993 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 A0A1W2PRG6 482 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 CYSRT1A8MQ03 144 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 RPL36A-HNRNPH2H7BZ11 118 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 SOCS2O14508 198 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 TXNDC12O95881 172 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 BCL10O95999 233 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 ACADSP16219 412 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 HOXB6P17509 224 aaKnown RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 LOXP28300 417 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 RPL4P36578 427 aaKnown RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 ACVR1BP36896 505 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 POLR2IP36954 125 aaKnown RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 CDKN2AP42771 156 aaKnown RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 CSNK1A1P48729 337 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 PRPS1P60891 318 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 TUBA1BP68363 451 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 TUBA4AP68366 448 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 ARF1P84077 181 aaKnown RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 ITGADQ13349 1161 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 KRR1Q13601 381 aaKnown RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 ETFDHQ16134 617 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 HIKESHIQ53FT3 197 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 SP5Q6BEB4 398 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 BEND4Q6ZU67 534 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 TUBA1AQ71U36 451 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 BHLHA15Q7RTS1 189 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 CDK20Q8IZL9 346 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 UBE2J2Q8N2K1 259 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 PQLC1Q8N2U9 271 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 ARIH2OSQ8N7S6 290 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 WDR31Q8NA23 367 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 ICA1LQ8NDH6 482 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 FGFBP3Q8TAT2 258 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 MAGEE2Q8TD90 523 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 ZNRF4Q8WWF5 429 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 MCHR2Q969V1 340 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 NRBF2Q96F24 287 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 CENPNQ96H22 339 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 SLC25A44Q96H78 314 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 SLC29A1Q99808 456 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 ACTR6Q9GZN1 396 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 FN3KQ9H479 309 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 CRLF2Q9HC73 371 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 PARPBPQ9NWS1 579 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 ASB6Q9NWX5 421 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 ELOVL5Q9NYP7 299 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 NPAP1Q9NZP6 1156 aa9.56□□□□□ -0.88
TPM1-217ENST00000559108 NKX1-2Q9UD57 310 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 RAI1Q7Z5J4 1906 aaPredicted RBP9.56□□□□□ -0.88
TPM1-217ENST00000559108 DCHS2Q6V1P9 2916 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 A0A096LPE4 126 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 A0A1W2PPR1 153 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 A0A1W2PPZ6 126 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 G3V2T6 193 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 C16orf97H3BN30 126 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 CNOT4O95628 575 aaKnown RBP9.55□□□□□ -0.88
TPM1-217ENST00000559108 GPANK1O95872 356 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 SCG5P05408 212 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 FCGR1AP12314 374 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 PRF1P14222 555 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 HIST1H1CP16403 213 aaKnown RBP9.55□□□□□ -0.88
TPM1-217ENST00000559108 ZNF23P17027 643 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 CDH2P19022 906 aaPredicted RBP9.55□□□□□ -0.88
TPM1-217ENST00000559108 MPGP29372 298 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 IFNGR2P38484 337 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 PCYT1AP49585 367 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 DAP3P51398 398 aaKnown RBP9.55□□□□□ -0.88
TPM1-217ENST00000559108 ZNF133P52736 654 aaPredicted RBP9.55□□□□□ -0.88
TPM1-217ENST00000559108 SORDQ00796 357 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 GK3PQ14409 553 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 P2RY6Q15077 328 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 RCN1Q15293 331 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 TAB1Q15750 504 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 ANKDD1AQ495B1 522 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 SLC35F1Q5T1Q4 408 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 TMEM236Q5W0B7 351 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 KDM4DQ6B0I6 523 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 ACSM5Q6NUN0 579 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 ZFP1Q6P2D0 407 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 SLC25A47Q6Q0C1 308 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 DPY19L2P2Q6ZN68 376 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 STK32CQ86UX6 486 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 MYPOPQ86VE0 399 aaPredicted RBP9.55□□□□□ -0.88
TPM1-217ENST00000559108 LINC00471Q8N535 108 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 POMGNT2Q8NAT1 580 aa9.55□□□□□ -0.88
TPM1-217ENST00000559108 OR1K1Q8NGR3 316 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms