RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 Q6ZRM9 215 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 SLC46A3Q7Z3Q1 461 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 ABHD12BQ7Z5M8 362 aaPredicted RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 ZIC4Q8N9L1 334 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 C1orf162Q8NEQ5 155 aaPredicted RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 BBS10Q8TAM1 723 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 GTF2H4Q92759 462 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 TMEM45BQ96B21 275 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 TLCD1Q96CP7 247 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 MAELQ96JY0 434 aaKnown RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 PAIP1Q9H074 479 aaKnown RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 RAD21L1Q9H4I0 556 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 A4GALTQ9NPC4 353 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 SELENONQ9NZV5 590 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 SLC13A4Q9UKG4 626 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 IFT52Q9Y366 437 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 CHST2Q9Y4C5 530 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 DSPPQ9NZW4 1301 aa6.38□□□□□ -1.39
SPG11-213ENST00000558988 SONP18583 2426 aaKnown RBP6.38□□□□□ -1.39
SPG11-213ENST00000558988 PLCE1Q9P212 2302 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 A0A096LPI6 279 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 IGHV1-18A0A0C4DH31 117 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 A0A1B0GWA3 101 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 A8MV72 311 aaPredicted RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 PDLIM1O00151 329 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 CD5LO43866 347 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 TPST1O60507 370 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 PEX14O75381 377 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 SLC43A1O75387 559 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 OPN1SWP03999 348 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 ZNF43P17038 809 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 HTR2AP28223 471 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 GRPRP30550 384 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 IDH3GP51553 393 aaPredicted RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 MAP2K6P52564 334 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 AQP5P55064 265 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 RGS8P57771 180 aaPredicted RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 SNRPD2P62316 118 aaKnown RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 ARF1P84077 181 aaKnown RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 CDK6Q00534 326 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 SF3A3Q12874 501 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPG11-213ENST00000558988 GLIPR1L2Q4G1C9 344 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 ALG10BQ5I7T1 473 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 PAGE3Q5JUK9 113 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 FAM209AQ5JX71 171 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 BEND6Q5SZJ8 279 aaPredicted RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 FOXB2Q5VYV0 432 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 C11orf71Q6IPW1 123 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 EPGNQ6UW88 154 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 MSANTD1Q6ZTZ1 278 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 CREB3L2Q70SY1 520 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 LINGO2Q7L985 606 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 SSX8Q7RTT4 187 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 COMTD1Q86VU5 262 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 KRT73Q86Y46 540 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 EPHX4Q8IUS5 362 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 MSRB3Q8IXL7 192 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 C10orf111Q8N326 155 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 GPR137CQ8N3F9 429 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 C17orf78Q8N4C9 275 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 OR1K1Q8NGR3 316 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 SPDL1Q96EA4 605 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 SLC38A2Q96QD8 506 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 SF3B5Q9BWJ5 86 aaKnown RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 AMBRA1Q9C0C7 1298 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 CHODLQ9H9P2 273 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 THUMPD1Q9NXG2 353 aaKnown RBP6.37□□□□□ -1.39
SPG11-213ENST00000558988 SLC25A37Q9NYZ2 338 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 VAPAQ9P0L0 249 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 RASD1Q9Y272 281 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 RTTNQ86VV8 2226 aa6.37□□□□□ -1.39
SPG11-213ENST00000558988 AKAP9Q99996 3911 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 SH3PXD2BA1X283 911 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 RNF212BA8MTL3 300 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 M0R3G1 203 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 M0R3H8 397 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 KPNA4O00629 521 aaPredicted RBP6.36□□□□□ -1.39
SPG11-213ENST00000558988 VAMP5O95183 116 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 CRYAAP02489 173 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 CECR9P0C854 216 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 CD79AP11912 226 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 SLC6A2P23975 617 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 APOBEC3AP31941 199 aaPredicted RBP6.36□□□□□ -1.39
SPG11-213ENST00000558988 P2RY4P51582 365 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 EGR4Q05215 589 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 FADDQ13158 208 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 SCARB2Q14108 478 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 CYP51A1Q16850 503 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 CEACAM16Q2WEN9 425 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 TMEM249Q2WGJ8 235 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 CHRFAM7AQ494W8 412 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 IQCCQ4KMZ1 466 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 AGBL2Q5U5Z8 902 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 AP1ARQ63HQ0 302 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 REEP3Q6NUK4 255 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 ZNF544Q6NX49 715 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 IL17RELQ6ZVW7 336 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 RHOUQ7L0Q8 258 aa6.36□□□□□ -1.39
SPG11-213ENST00000558988 SMYD1Q8NB12 490 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms