RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ACAA2P42765 397 aaKnown RBP8.29□□□□□ -1.08
SPG11-212ENST00000558790 COMPP49747 757 aaPredicted RBP8.29□□□□□ -1.08
SPG11-212ENST00000558790 LGALS4P56470 323 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 CLDN17P56750 224 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 ARF1P84077 181 aaKnown RBP8.29□□□□□ -1.08
SPG11-212ENST00000558790 DAG1Q14118 895 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 GNA13Q14344 377 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 MAPK11Q15759 364 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 ELFN2Q5R3F8 820 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 C1orf140Q5VVS0 124 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 WBP2NLQ6ICG8 309 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 UGT2A3Q6UWM9 527 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 MDP1Q86V88 176 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 CARM1Q86X55 608 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 VRK2Q86Y07 508 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 ZNF440Q8IYI8 595 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 KDM8Q8N371 416 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 KLHL36Q8N4N3 616 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 ZNF781Q8N8C0 355 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 VPS37AQ8NEZ2 397 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 CLDND2Q8NHS1 167 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 TMEM186Q96B77 213 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 ZMYND19Q96E35 227 aaPredicted RBP8.29□□□□□ -1.08
SPG11-212ENST00000558790 AJUBAQ96IF1 538 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 PKNOX2Q96KN3 472 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 TEX37Q96LM6 180 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 CCDC115Q96NT0 180 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 ZIM3Q96PE6 472 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 MRPL37Q9BZE1 423 aaKnown RBP8.29□□□□□ -1.08
SPG11-212ENST00000558790 HIF1ANQ9NWT6 349 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 B3GAT1Q9P2W7 334 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 RCE1Q9Y256 329 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 RASD1Q9Y272 281 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 SPEF1Q9Y4P9 236 aa8.29□□□□□ -1.08
SPG11-212ENST00000558790 C9orf118A6NHY6 69 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 FTCDNL1E5RQL4 147 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 RPL36A-HNRNPH2H7BZ11 118 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 M0R233 179 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 ZNF432O94892 652 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 MSMBP08118 114 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 SAGP10523 405 aaPredicted RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 NR2F1P10589 423 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 CREB1P16220 341 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 CAPZA2P47755 286 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 CLNS1AP54105 237 aaKnown RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 NME5P56597 212 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 POU3F1Q03052 451 aaPredicted RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 GSTA3Q16772 222 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 CEACAM16Q2WEN9 425 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 LIN52Q52LA3 116 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 TOR2AQ5JU69 321 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 SHQ1Q6PI26 577 aaKnown RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 PEX5LQ8IYB4 626 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 RIBC1Q8N443 379 aaPredicted RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 MRPL24Q96A35 216 aaKnown RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 PANX1Q96RD7 426 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 PTDSS2Q9BVG9 487 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 RACGAP1Q9H0H5 632 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 MTHFD2LQ9H903 347 aaPredicted RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 CRLF2Q9HC73 371 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 GPR35Q9HC97 309 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 LGALS13Q9UHV8 139 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 BTNL2Q9UIR0 455 aa8.28□□□□□ -1.08
SPG11-212ENST00000558790 ZNF443Q9Y2A4 671 aaPredicted RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 EPPK1P58107 5090 aaKnown RBP8.28□□□□□ -1.08
SPG11-212ENST00000558790 DOCK11Q5JSL3 2073 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 A0A096LPI6 279 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 CCDC154A6NI56 674 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 SYNGR3O43761 229 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 SLC43A1O75387 559 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 NCR1O76036 304 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 AHSA1O95433 338 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 HLA-HP01893 362 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 BCHEP06276 602 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 ALDOCP09972 364 aaKnown RBP8.27□□□□□ -1.09
SPG11-212ENST00000558790 TFPTP0C1Z6 253 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 NR4A1P22736 598 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 GTF2E2P29084 291 aaKnown RBP8.27□□□□□ -1.09
SPG11-212ENST00000558790 S100A3P33764 101 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 ARR3P36575 388 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 ALDH3B1P43353 468 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 GPR6P46095 362 aaPredicted RBP8.27□□□□□ -1.09
SPG11-212ENST00000558790 RPS5P46782 204 aaKnown RBP8.27□□□□□ -1.09
SPG11-212ENST00000558790 ANXA11P50995 505 aaKnown RBP8.27□□□□□ -1.09
SPG11-212ENST00000558790 HILS1P60008 231 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 COPZ1P61923 177 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 EGR4Q05215 589 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 MAD2L1BPQ15013 274 aaPredicted RBP8.27□□□□□ -1.09
SPG11-212ENST00000558790 CHI3L2Q15782 390 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 PHYHD1Q5SRE7 291 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 RNF220Q5VTB9 566 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 ATG16L1Q676U5 607 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 PGM2L1Q6PCE3 622 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 SERPINA11Q86U17 422 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 LRRC34Q8IZ02 419 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 TMEM123Q8N131 208 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 GPR137CQ8N3F9 429 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 TRIML2Q8N7C3 387 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 C3orf56Q8N813 242 aa8.27□□□□□ -1.09
SPG11-212ENST00000558790 EIF1ADQ8N9N8 165 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms