RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 HIST3H3Q16695 136 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 ACSF3Q4G176 576 aaPredicted RBP13.23□□□□□ -0.29
VPS18-202ENST00000558474 LCN1P1Q5VSP4 162 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 NIPAL3Q6P499 406 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 PLBD1Q6P4A8 553 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 MEPCEQ7L2J0 689 aaKnown RBP13.23□□□□□ -0.29
VPS18-202ENST00000558474 ZBTB46Q86UZ6 589 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 GMPPAQ96IJ6 420 aaPredicted RBP13.23□□□□□ -0.29
VPS18-202ENST00000558474 TXNDC15Q96J42 360 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 ZFP3Q96NJ6 502 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 RBP7Q96R05 134 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 TM9SF2Q99805 663 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 CCNB1IP1Q9NPC3 277 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 ASF1BQ9NVP2 202 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 MED29Q9NX70 200 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 HAO2Q9NYQ3 351 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 TNFRSF10DQ9UBN6 386 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 ING1Q9UK53 422 aaPredicted RBP13.23□□□□□ -0.29
VPS18-202ENST00000558474 PCDHGB5Q9Y5G0 923 aa13.23□□□□□ -0.29
VPS18-202ENST00000558474 SLC22A23A1A5C7 686 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 MAGEA13PA6NCF6 341 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 EFCAB10A6NFE3 127 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 M0R129 80 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 PRRG2O14669 202 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 AQP8O94778 261 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 CRHP06850 196 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 ABOP16442 354 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 SLC15A1P46059 708 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 ZNF133P52736 654 aaPredicted RBP13.22□□□□□ -0.29
VPS18-202ENST00000558474 CDH11P55287 796 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 CLRN1P58418 232 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 POU4F2Q12837 409 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 LY6DQ14210 128 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 STK11Q15831 433 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 KLHL22Q53GT1 634 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 GFRALQ6UXV0 394 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 P4HA3Q7Z4N8 544 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 NOXO1Q8NFA2 376 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 BPIFB6Q8NFQ5 453 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 ABHD3Q8WU67 409 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 ZNF385AQ96PM9 386 aaKnown RBP13.22□□□□□ -0.29
VPS18-202ENST00000558474 OR2M2Q96R28 347 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 RACGAP1Q9H0H5 632 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 TP63Q9H3D4 680 aaPredicted RBP13.22□□□□□ -0.29
VPS18-202ENST00000558474 ZNF696Q9H7X3 374 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 DNAJC27Q9NZQ0 273 aa13.22□□□□□ -0.29
VPS18-202ENST00000558474 MBD3L4A6NDZ8 208 aaPredicted RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 MBD3L3A6NE82 208 aaPredicted RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 MBD3L5A6NJ08 208 aaPredicted RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 FAM183AA6NL82 134 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 ATXN7O15265 892 aaPredicted RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 FAM20BO75063 409 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 SS18L1O75177 396 aaPredicted RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 SLC43A1O75387 559 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 GLCEO94923 617 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 TPOP07202 933 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 DBTP11182 482 aaKnown RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 SPI1P17947 270 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 FMO3P31513 532 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 TIMP3P35625 211 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 MTNR1AP48039 350 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 RAB40BQ12829 278 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 GGTLC2Q14390 218 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 RIPPLY2Q5TAB7 128 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 ZNF585AQ6P3V2 769 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 AAED1Q7RTV5 226 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 TMEM123Q8N131 208 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 CYB561A3Q8NBI2 242 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 ST6GALNAC3Q8NDV1 305 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 MBD3L2Q8NHZ7 208 aaPredicted RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 MYDGFQ969H8 173 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 TMEM54Q969K7 222 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 TRIB1Q96RU8 372 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 TEAD3Q99594 435 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 EMC6Q9BV81 110 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 LINC00470Q9BZP3 86 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 SYT4Q9H2B2 425 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 DUSP21Q9H596 190 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 RPRD1BQ9NQG5 326 aaKnown RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 FKBP14Q9NWM8 211 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 ASB6Q9NWX5 421 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 PSORS1C1Q9UIG5 152 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 NOSIPQ9Y314 301 aaKnown RBP13.21□□□□□ -0.29
VPS18-202ENST00000558474 PCDHGB1Q9Y5G3 927 aa13.21□□□□□ -0.29
VPS18-202ENST00000558474 ATMQ13315 3056 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 ARHGAP21Q5T5U3 1957 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 MRPL33O75394 65 aaKnown RBP13.2□□□□□ -0.3
VPS18-202ENST00000558474 TGM6O95932 706 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 LYNP07948 512 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 CSNK1A1P48729 337 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 SLC35A2P78381 396 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 ZNF91Q05481 1191 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 RUNX1T1Q06455 604 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 CAMK2DQ13557 499 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 APOFQ13790 326 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 SMN1Q16637 294 aaKnown RBP13.2□□□□□ -0.3
VPS18-202ENST00000558474 C1orf185Q5T7R7 199 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 CD163Q86VB7 1156 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 C20orf196Q8IYI0 205 aa13.2□□□□□ -0.3
VPS18-202ENST00000558474 POMGNT2Q8NAT1 580 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms