RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 TGDSO95455 350 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 MT-ATP6P00846 226 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 SERPINA5P05154 406 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 PATE4P0C8F1 98 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 AHCYP23526 432 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 SLC6A2P23975 617 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 CSNK1A1P48729 337 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 BIDP55957 195 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 MRPS11P82912 194 aaKnown RBP13.67□□□□□ -0.22
SCFD1-224ENST00000557713 GALK2Q01415 458 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 ARMC8Q8IUR7 673 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 C10orf53Q8N6V4 93 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 TMEM186Q96B77 213 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 ZNF385DQ9H6B1 395 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 TCF7L2Q9NQB0 619 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 ZNF275Q9NSD4 429 aaPredicted RBP13.67□□□□□ -0.22
SCFD1-224ENST00000557713 HIF1ANQ9NWT6 349 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 CCDC167Q9P0B6 97 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 SLC7A8Q9UHI5 535 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 DUSP13Q9UII6 198 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 FZR1Q9UM11 496 aa13.67□□□□□ -0.22
SCFD1-224ENST00000557713 FMO6PO60774 539 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 RP2O75695 350 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 SERPINI2O75830 405 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 NCR1O76036 304 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 TFP02787 698 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 ADORA3P0DMS8 318 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 SAGP10523 405 aaPredicted RBP13.66□□□□□ -0.22
SCFD1-224ENST00000557713 NAT2P11245 290 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 AQP1P29972 269 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 IDH3AP50213 366 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 LMO4P61968 165 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 ZP4Q12836 540 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 ZNF613Q6PF04 617 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 LRFN4Q6PJG9 635 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 RANBP3LQ86VV4 465 aaPredicted RBP13.66□□□□□ -0.22
SCFD1-224ENST00000557713 SLC22A24Q8N4F4 322 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 HIPK4Q8NE63 616 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 OR6X1Q8NH79 312 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 ZFAND2BQ8WV99 257 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 MCHR1Q99705 422 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 EBF4Q9BQW3 602 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 NARFLQ9H6Q4 476 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 METTL17Q9H7H0 456 aaPredicted RBP13.66□□□□□ -0.22
SCFD1-224ENST00000557713 TAS2R5Q9NYW4 299 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 TREM2Q9NZC2 230 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 GLTPQ9NZD2 209 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 CORO2BQ9UQ03 480 aa13.66□□□□□ -0.22
SCFD1-224ENST00000557713 EVPLLA8MZ36 301 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 C11orf98E9PRG8 122 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 POLR3GO15318 223 aaPredicted RBP13.65□□□□□ -0.22
SCFD1-224ENST00000557713 LYPD3O95274 346 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 MSMBP08118 114 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 GAAP10253 952 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 PCBP3P57721 371 aaKnown RBP13.65□□□□□ -0.22
SCFD1-224ENST00000557713 NPTX1Q15818 432 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 DUSP7Q16829 419 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 DLEU7Q6UYE1 221 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 C12orf54Q6X4T0 127 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 SLC35D2Q76EJ3 337 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 SMYD1Q8NB12 490 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 SEMA6DQ8NFY4 1073 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 C7orf26Q96N11 449 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 ARHGDIGQ99819 225 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 CCDC28BQ9BUN5 200 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 ZNF416Q9BWM5 594 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 LPAR2Q9HBW0 351 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 TMBIM4Q9HC24 238 aa13.65□□□□□ -0.22
SCFD1-224ENST00000557713 ZNF346Q9UL40 294 aaKnown RBP13.65□□□□□ -0.22
SCFD1-224ENST00000557713 TENM1Q9UKZ4 2725 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 M0R3H8 397 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 PPIHO43447 177 aaKnown RBP13.64□□□□□ -0.23
SCFD1-224ENST00000557713 CHP2O43745 196 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 ERLIN1O75477 346 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 OR6A2O95222 327 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 CLPTM1O96005 669 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 THY1P04216 161 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 OR8G3PP0DMU2 310 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 CFPP27918 469 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 LSP1P33241 339 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 MAGEB1P43366 347 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 ZNF74Q16587 644 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 RUNDC3AQ59EK9 446 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 PTOV1Q86YD1 416 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 PAQR4Q8N4S7 273 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-224ENST00000557713 GPR32P1Q8NGA4 272 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 OR51F2Q8NH61 342 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 SLC25A44Q96H78 314 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-224ENST00000557713 LRRC37BQ96QE4 947 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 SH3GL3Q99963 347 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 CPPED1Q9BRF8 314 aaPredicted RBP13.64□□□□□ -0.23
SCFD1-224ENST00000557713 TMEM38BQ9NVV0 291 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 GRIP1Q9Y3R0 1128 aa13.64□□□□□ -0.23
SCFD1-224ENST00000557713 IGLV3-9A0A075B6K5 115 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 A0A1W2PPW3 197 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 SLC22A23A1A5C7 686 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 C17orf100A8MU93 164 aa13.63□□□□□ -0.23
SCFD1-224ENST00000557713 DHHO43323 396 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms