RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 GADD45GO95257 159 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 PLAUP00749 431 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 IGHG1P01857 330 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 F13BP05160 661 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 MAKP20794 623 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 CD40P25942 277 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 ART1P52961 327 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 CLRN1P58418 232 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 RPS4XP62701 263 aaKnown RBP10.93□□□□□ -0.66
SLIRP-211ENST00000557623 ARF1P84077 181 aaKnown RBP10.93□□□□□ -0.66
SLIRP-211ENST00000557623 MELKQ14680 651 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 HIKESHIQ53FT3 197 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 ALG10Q5BKT4 473 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 FGD3Q5JSP0 725 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 PHYHD1Q5SRE7 291 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 LCN8Q6JVE9 175 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 PODNL1Q6PEZ8 512 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 TBPL2Q6SJ96 375 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 CYP2R1Q6VVX0 501 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 OAFQ86UD1 273 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF611Q8N823 705 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 SLC7A13Q8TCU3 470 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 AKAP1Q92667 903 aaKnown RBP eCLIP10.93□□□□□ -0.66
SLIRP-211ENST00000557623 TMEM54Q969K7 222 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 DHRS1Q96LJ7 313 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 BEX4Q9NWD9 120 aaPredicted RBP10.93□□□□□ -0.66
SLIRP-211ENST00000557623 GLTPQ9NZD2 209 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 POFUT2Q9Y2G5 429 aa10.93□□□□□ -0.66
SLIRP-211ENST00000557623 ALPK2Q86TB3 2170 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 A0A096LPE4 126 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 A0A1W2PPZ6 126 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ABCD4O14678 606 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 GYG2O15488 501 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 TMCC2O75069 709 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 PDE5AO76074 875 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 DIRAS1O95057 198 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 PGA4P0DJD7 388 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 PGA3P0DJD8 388 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 NR2C1P13056 603 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ACADSP16219 412 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 CD53P19397 219 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ATP6V1B2P21281 511 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 FUT4P22083 530 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 SPIBQ01892 262 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 DEFB113Q30KQ7 82 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 C3orf36Q3SXR2 165 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF672Q499Z4 452 aaPredicted RBP10.92□□□□□ -0.66
SLIRP-211ENST00000557623 IQCCQ4KMZ1 466 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF627Q7L945 461 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 PIWIL3Q7Z3Z3 882 aaKnown RBP10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ZDHHC21Q8IVQ6 265 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 FAM169BQ8N8A8 192 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 MOSPD2Q8NHP6 518 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ASB10Q8WXI3 467 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 NANOS1Q8WY41 292 aaKnown RBP10.92□□□□□ -0.66
SLIRP-211ENST00000557623 FBXW5Q969U6 566 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ASB9Q96DX5 294 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 LRGUKQ96M69 825 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 ALPK1Q96QP1 1244 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 CCL19Q99731 98 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 FOXB1Q99853 325 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 THTPAQ9BU02 230 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 C1QTNF6Q9BXI9 259 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 TRIM15Q9C019 465 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 TXNIPQ9H3M7 391 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 MAGIXQ9H6Y5 334 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 AURKCQ9UQB9 309 aa10.92□□□□□ -0.66
SLIRP-211ENST00000557623 CSMD2Q7Z408 3487 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 TRAV27A0A087WT01 109 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 TRMUO75648 421 aaKnown RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 KRT36O76013 467 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 IGHMP01871 453 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 IFNGR2P38484 337 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 GPR4P46093 362 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 CTXN1P60606 82 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 TRAP1Q12931 704 aaKnown RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 ZBED5Q49AG3 693 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 FAM98BQ52LJ0 330 aaKnown RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 FAM205BPQ63HN1 556 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 SLC22A25Q6T423 547 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF813Q6ZN06 617 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 WDFY1Q8IWB7 410 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 NOXO1Q8NFA2 376 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 KBTBD8Q8NFY9 601 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 OR4K5Q8NGD3 323 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 OR13C2Q8NGS9 318 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 OR52J3Q8NH60 311 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 OR51A7Q8NH64 312 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 LILRB1Q8NHL6 650 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 FNDC8Q8TC99 324 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 ZNF837Q96EG3 531 aaPredicted RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 FAM46AQ96IP4 442 aaKnown RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 SLC38A2Q96QD8 506 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 TNFRSF13CQ96RJ3 184 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 SEPHS2Q99611 448 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 KCNS3Q9BQ31 491 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 BTBD10Q9BSF8 475 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 MRPL13Q9BYD1 178 aaKnown RBP10.91□□□□□ -0.66
SLIRP-211ENST00000557623 CXXC4Q9H2H0 198 aa10.91□□□□□ -0.66
SLIRP-211ENST00000557623 NELFAQ9H3P2 528 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms