RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CALHM2Q9HA72 323 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DNAJC12Q9UKB3 198 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RBMX2Q9Y388 322 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TBL2Q9Y4P3 447 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR1A2Q9Y585 309 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CLTCL1P53675 1640 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ABCC12Q96J65 1359 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 JCADQ9P266 1359 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PHLPP1O60346 1717 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GOLGA3Q08378 1498 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SYNMO15061 1565 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SMCHD1A6NHR9 2005 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 EPRSP07814 1512 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RIMBP3Q9UFD9 1639 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KCNE1BA0A087WTH5 132 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 A0A0J9YWU9 116 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 A0A1W2PPV4 95 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MBLAC1A4D2B0 266 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PP2D1A8MPX8 630 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SCAMP2O15127 329 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GMDSO60547 372 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 HSF2BPO75031 334 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DUSP11O75319 330 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SERPINE2P07093 398 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NUDT17P0C025 328 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FAM228BP0C875 321 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CD37P11049 281 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 XRCC1P18887 633 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GZMHP20718 246 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PSMA5P28066 241 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SFNP31947 248 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 EPHX2P34913 555 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SGSHP51688 502 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ATP5IP56385 69 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 LSM6P62312 80 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KCNJ2P63252 427 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ADARB1P78563 741 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ITIH4Q14624 930 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CD226Q15762 336 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 LDLRAP1Q5SW96 308 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SULT1C3Q6IMI6 304 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NANOGP8Q6NSW7 305 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ZSCAN25Q6NSZ9 544 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ZFP1Q6P2D0 407 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DPY19L2P2Q6ZN68 376 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ARCQ7LC44 396 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SNX20Q7Z614 316 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SETD3Q86TU7 594 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 THOC6Q86W42 341 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NR2C2APQ86WQ0 139 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 STXBP6Q8NFX7 210 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR2M7Q8NG81 312 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR10T2Q8NGX3 314 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NANPQ8TBE9 248 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FBXO25Q8TCJ0 367 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PCNPQ8WW12 178 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RLN3Q8WXF3 142 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 NRGNQ92686 78 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FAM46BQ96A09 425 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KIAA1143Q96AT1 154 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF689Q96CS4 500 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CNRIP1Q96F85 164 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR2V2Q96R30 315 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TGS1Q96RS0 853 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KLHDC3Q9BQ90 382 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PELOQ9BRX2 385 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TEKT3Q9BXF9 490 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 GSDMCQ9BYG8 508 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ELOVL4Q9GZR5 314 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RANBP3Q9H6Z4 567 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 UGT1A7Q9HAW7 530 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 DEPPQ9NTK1 212 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 BABAM2Q9NXR7 383 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SLC17A7Q9P2U7 560 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 LHX3Q9UBR4 397 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ANAPC7Q9UJX3 599 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 OR52A1Q9UKL2 312 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 COPS3Q9UNS2 423 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RNF115Q9Y4L5 304 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 A0A1W2PP64 1363 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 C9orf84Q5VXU9 1444 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KIF20BQ96Q89 1820 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PPIAL4EA0A075B759 164 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PPIAL4CA0A0B4J2A2 164 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SMIM31A0A1B0GVY4 71 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 A0A1W2PQL4 384 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PCP4L1A6NKN8 68 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 FOXI3A8MTJ6 420 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PPIAL4DF5H284 164 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 C15orf65H3BRN8 121 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 EEF2KO00418 725 aaKnown RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 KPNA4O00629 521 aaPredicted RBP1.36□□□□□ -2.19
HIF1A-212ENST00000557538 ARPC5O15511 151 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SYNGR4O95473 234 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 SEMA4FO95754 770 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 CGAP01215 116 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 MBP02144 154 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 TNNC2P02585 160 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 PCCBP05166 539 aa1.36□□□□□ -2.19
HIF1A-212ENST00000557538 RPLP0P05388 317 aaKnown RBP1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms