RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MTERF3Q96E29 417 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 BOD1Q96IK1 185 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 HRASLS5Q96KN8 279 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 OR7D2Q96RA2 312 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SDF2Q99470 211 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SPXQ9BT56 116 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 KATNB1Q9BVA0 655 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TUBB1Q9H4B7 451 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SERHL2Q9H4I8 314 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 NARFLQ9H6Q4 476 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 LPAR2Q9HBW0 351 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PAPOLBQ9NRJ5 636 aaKnown RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PARPBPQ9NWS1 579 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 HIF1ANQ9NWT6 349 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 PPP1R14DQ9NXH3 145 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM181Q9P2C4 612 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 ATP6V1HQ9UI12 483 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 MKLN1Q9UL63 735 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 FIS1Q9Y3D6 152 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 HDGFL3Q9Y3E1 203 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 SPIN1Q9Y657 262 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.05□□□□□ -1.6
VPS33B-207ENST00000557470 NOTCH1P46531 2555 aa5.05□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM129A0AVI4 362 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM72A0PK05 275 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 SH3PXD2BA1X283 911 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 LIPT2A6NK58 231 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 H3BQF6 201 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 TRIM77I1YAP6 450 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 RAB27BO00194 218 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 NR5A2O00482 541 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 WNT9BO14905 357 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ANKRD28O15084 1053 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 EIF1BO60739 113 aaKnown RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 STX11O75558 287 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 UGT2B17O75795 530 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 LGI1O95970 557 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 IGLV1-44P01699 117 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ERCC1P07992 297 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ADRA2AP08913 450 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 DDX5P17844 614 aaKnown RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 NPR2P20594 1047 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 THBS4P35443 961 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 HPCAL1P37235 193 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 KHKP50053 298 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 NAA20P61599 178 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 SLC35A1P78382 337 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 MXRA7P84157 204 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 DEFA6Q01524 100 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 HGFACQ04756 655 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 SCGB2A2Q13296 93 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 DYNC1I2Q13409 638 aaKnown RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 CAMK2DQ13557 499 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 PTGR1Q14914 329 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 MAPK14Q16539 360 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ATP6AP1LQ52LC2 224 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 C9orf152Q5JTZ5 239 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 CFAP157Q5JU67 520 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ANKRD16Q6P6B7 361 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 EMBQ6PCB8 327 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 UGT2A3Q6UWM9 527 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 USP43Q70EL4 1123 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 EIF3MQ7L2H7 374 aaKnown RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF572Q7Z3I7 529 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 GRINAQ7Z429 371 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 HMGN2P46Q86SG4 172 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 MYPOPQ86VE0 399 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 CARM1Q86X55 608 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 CDK20Q8IZL9 346 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 NUP37Q8NFH4 326 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 OR4F15Q8NGB8 312 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 OR9K2Q8NGE7 335 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 OR1K1Q8NGR3 316 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 CLDND2Q8NHS1 167 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF563Q8TA94 476 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 SETD6Q8TBK2 473 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 SFXN5Q8TD22 340 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 GIMAP1Q8WWP7 306 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 OR5P2Q8WZ92 322 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 TMEM186Q96B77 213 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 CCDC126Q96EE4 140 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 AURKBQ96GD4 344 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF385AQ96PM9 386 aaKnown RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ALKBH3Q96Q83 286 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 FMO2Q99518 471 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 DOK1Q99704 481 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 RBM4Q9BWF3 364 aaKnown RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF350Q9GZX5 532 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 TPK1Q9H3S4 243 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ZNF442Q9H7R0 627 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 DYNLRB1Q9NP97 96 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ACTR3BQ9P1U1 418 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 CRNNQ9UBG3 495 aaPredicted RBP5.04□□□□□ -1.6
VPS33B-207ENST00000557470 DNAJB9Q9UBS3 223 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 ZDHHC8Q9ULC8 765 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 TRAPPC4Q9Y296 219 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 TMED5Q9Y3A6 229 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 PCDHGB1Q9Y5G3 927 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 POMT1Q9Y6A1 747 aa5.04□□□□□ -1.6
VPS33B-207ENST00000557470 LOC105371242A0A075B767 164 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms