RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 TENM1Q9UKZ4 2725 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 A0A096LNT2 108 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 IGLV3-32A0A0A0MS00 114 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 CDHR4A6H8M9 788 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 H3BN98 237 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 OVOL3O00110 214 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 GTPBP1O00178 669 aaKnown RBP11.09□□□□□ -0.63
SHMT2-230ENST00000557427 FRS3O43559 492 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 HCRTR2O43614 444 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 GABARAPO95166 117 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 FADS2O95864 444 aaKnown RBP11.09□□□□□ -0.63
SHMT2-230ENST00000557427 NGFRP08138 427 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 LCN1P31025 176 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 UGT2B10P36537 528 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 MAP2K4P45985 399 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 OMPP47874 163 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 PCYT1AP49585 367 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 CDK5Q00535 292 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 IRF3Q14653 427 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 CD226Q15762 336 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 MAPK14Q16539 360 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 SGCBQ16585 318 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 OCLNQ16625 522 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 GLYR1Q49A26 553 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-230ENST00000557427 SLC25A30Q5SVS4 291 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
SHMT2-230ENST00000557427 CASP12Q6UXS9 341 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 ZNF730Q6ZMV8 503 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 SLC16A12Q6ZSM3 486 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 RASSF6Q6ZTQ3 369 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 RRM2BQ7LG56 351 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 ZNF614Q8N883 585 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 OR8J1Q8NGP2 316 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 B4GALNT2Q8NHY0 566 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 SLC35B4Q969S0 331 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 SLC41A3Q96GZ6 507 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 NPAS1Q99742 590 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 KLHDC3Q9BQ90 382 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 BEX2Q9BXY8 128 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 HOXD1Q9GZZ0 328 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 KRCC1Q9NPI7 259 aaPredicted RBP11.09□□□□□ -0.63
SHMT2-230ENST00000557427 CTPS2Q9NRF8 586 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 TESQ9UGI8 421 aaKnown RBP11.09□□□□□ -0.63
SHMT2-230ENST00000557427 WARS2Q9UGM6 360 aaKnown RBP11.09□□□□□ -0.63
SHMT2-230ENST00000557427 KCNE5Q9UJ90 142 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 CARD8Q9Y2G2 431 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 MGAM2Q2M2H8 2515 aa11.09□□□□□ -0.63
SHMT2-230ENST00000557427 CENPVL1A0A0U1RR11 272 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-230ENST00000557427 TRAPPC13A5PLN9 417 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 SLC22A20A6NK97 555 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 LINC01387J3KSC0 135 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 EIF1AYO14602 144 aaKnown RBP11.08□□□□□ -0.64
SHMT2-230ENST00000557427 MSTNO14793 375 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 KLF4O43474 513 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 OIP5O43482 229 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 TMCC2O75069 709 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 SOX14O95416 240 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 NUDT14O95848 222 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 THBDP07204 575 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 FPR3P25089 353 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 IDUAP35475 653 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 CD79BP40259 229 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 SLC15A1P46059 708 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF41P51814 821 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-230ENST00000557427 ATP12AP54707 1039 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 KLHL26Q53HC5 615 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 MEDAGQ5VYS4 303 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF704Q6ZNC4 412 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-230ENST00000557427 RNF113BQ8IZP6 322 aaKnown RBP11.08□□□□□ -0.64
SHMT2-230ENST00000557427 STX19Q8N4C7 294 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 CLDN22Q8N7P3 220 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 ARIH2OSQ8N7S6 290 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF611Q8N823 705 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 CNEP1R1Q8N9A8 125 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 OIT3Q8WWZ8 545 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 STARD4Q96DR4 205 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 ZNF845Q96IR2 970 aaPredicted RBP11.08□□□□□ -0.64
SHMT2-230ENST00000557427 ZFP3Q96NJ6 502 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 UCN2Q96RP3 112 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 PRR14Q9BWN1 585 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 CDCA4Q9BXL8 241 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 SLCO5A1Q9H2Y9 848 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 TMEM185BQ9H7F4 350 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 MED17Q9NVC6 651 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 TMEM160Q9NX00 188 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 CLCF1Q9UBD9 225 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 LAMP3Q9UQV4 416 aa11.08□□□□□ -0.64
SHMT2-230ENST00000557427 YLPM1P49750 1951 aaKnown RBP11.08□□□□□ -0.64
SHMT2-230ENST00000557427 A0A087WZY1 265 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 A0A1W2PNV4 684 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 A0A1W2PPW3 197 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 A0A1W2PQD3 144 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 CLDN24A6NM45 220 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 HS3ST1O14792 307 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 ADAM11O75078 769 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 THY1P04216 161 aa11.07□□□□□ -0.64
SHMT2-230ENST00000557427 IGFBP1P08833 259 aaPredicted RBP11.07□□□□□ -0.64
SHMT2-230ENST00000557427 EGR1P18146 543 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms