RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TCTN2Q96GX1 697 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF300Q96RE9 604 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GNB4Q9HAV0 340 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SIX2Q9NPC8 291 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 PIK3C2BO00750 1634 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 RFPL4AA6NLU0 287 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 POM121CA8CG34 1229 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 RFPL4AL1F8VTS6 287 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SIM1P81133 766 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 SLC25A11Q02978 314 aaKnown RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 KIR2DS3Q14952 304 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 B3GNT9Q6UX72 402 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 OR2T6Q8NHC8 308 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 EID2BQ96D98 161 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GLIS2Q9BZE0 524 aaPredicted RBP8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GPR34Q9UPC5 381 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 PSMB2P49721 201 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 OR10A3P58181 314 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 TCEAL1Q15170 157 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 ATP6V1FQ16864 119 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 NCR3LG1Q68D85 454 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 EXTL1Q92935 676 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 GABARAPL1Q9H0R8 117 aa8.22□□□□□ -1.09
SYNE3-205ENST00000557275 DEFB118Q96PH6 123 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 OR2A14Q96R47 310 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 SEC11CQ9BY50 192 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 FAM183AA6NL82 134 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 MGMTP16455 207 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 NKX2-1P43699 371 aaPredicted RBP8.21□□□□□ -1.09
SYNE3-205ENST00000557275 OR3A1P47881 315 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 Q6ZTK2 550 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 THNSL2Q86YJ6 484 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 NKX2-4Q9H2Z4 354 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 ZCWPW2A0A1B0GU75 182 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF17P17021 662 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 POU3F2P20265 443 aaPredicted RBP8.21□□□□□ -1.09
SYNE3-205ENST00000557275 GDNFP39905 211 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 OR2T2Q6IF00 324 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 FDX2Q6P4F2 183 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 CREB3L4Q8TEY5 395 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 BOCQ9BWV1 1114 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 POLDIP2Q9Y2S7 368 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 MST1RQ04912 1400 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 KDM4FA0A1W2PPD8 638 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 M0R1X1 148 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 TNFSF12O43508 249 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 MMP15P51511 669 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 RGNQ15493 299 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 SLC7A5P1Q8MH63 180 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 PARD6AQ9NPB6 346 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 GPR173Q9NS66 373 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 FLVCR2Q9UPI3 526 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 SLIT2O94813 1529 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 ZNF814B7Z6K7 855 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 SLC35A1P78382 337 aa8.21□□□□□ -1.09
SYNE3-205ENST00000557275 HSD17B13Q7Z5P4 300 aaPredicted RBP8.21□□□□□ -1.09
SYNE3-205ENST00000557275 GBAP04062 536 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 PPP1R8Q12972 351 aaKnown RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 SLC35D3Q5M8T2 416 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 KLHDC8AQ8IYD2 350 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 RAB24Q969Q5 203 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 WDR76Q9H967 626 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 GPR52Q9Y2T5 361 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 ZNFX1Q9P2E3 1918 aaKnown RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 ZGRF1Q86YA3 2104 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 BTF3P20290 206 aaKnown RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 SFXN4Q6P4A7 337 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 SPRED1Q7Z699 444 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 BCO2Q9BYV7 579 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 PHLPP1O60346 1717 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 TCRBV7S2A1N4TA0A589 114 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 TOX3O15405 576 aaPredicted RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 COX6CP09669 75 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 ATXN1LP0C7T5 689 aaKnown RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 COMMD6Q7Z4G1 85 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 TMEM217Q8N7C4 229 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 EDARADDQ8WWZ3 215 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 DUS3LQ96G46 650 aaKnown RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 TP53RKQ96S44 253 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 PMS2P1A4D2B8 440 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 FGF3P11487 239 aaPredicted RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 SLC9A3R2Q15599 337 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 ELOA3CA0A087WX78 387 aaPredicted RBP8.21□□□□□ -1.1
SYNE3-205ENST00000557275 FAM227AF5H4B4 570 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 ATP1B1P05026 303 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 CALCBP10092 127 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 KRTDAPP60985 99 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 OXA1LQ15070 435 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 GDPD3Q7L5L3 318 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 TMEM139Q8IV31 216 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 CAPNS2Q96L46 248 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 KCNK6Q9Y257 313 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 NXPH2O95156 264 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 SMIM6P0DI80 62 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 GDF10P55107 478 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 UNC50Q53HI1 259 aa8.21□□□□□ -1.1
SYNE3-205ENST00000557275 ZNF280AP59817 542 aaPredicted RBP8.2□□□□□ -1.1
SYNE3-205ENST00000557275 Q6ZVU0 165 aa8.2□□□□□ -1.1
SYNE3-205ENST00000557275 TMEM106AQ96A25 262 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms