RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 C2orf16Q68DN1 1984 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 FANCMQ8IYD8 2048 aa10.36□□□□□ -0.75
SRP54-213ENST00000556994 HMSDA8MTL9 139 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 KRBOX1C9JBD0 128 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 LDOC1O95751 146 aaPredicted RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 EGFP01133 1207 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 APOC3P02656 99 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 FGF2P09038 288 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 SLC35E2P0CK97 266 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 SLC6A19Q695T7 634 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 TSSK4Q6SA08 328 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 SLC16A9Q7RTY1 509 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 SLC43A2Q8N370 569 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 DUSP19Q8WTR2 217 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 PMM1Q92871 262 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 PPP1R14AQ96A00 147 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 RBM18Q96H35 190 aaKnown RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 ZNF578Q96N58 590 aaPredicted RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 ELF4Q99607 663 aaPredicted RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 KXD1Q9BQD3 176 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 LAMP5Q9UJQ1 280 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 ETV7Q9Y603 341 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 TRBV5-5A0A0J9YX44 114 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 LINC01553A4QN01 128 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 GGT3PA6NGU5 568 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 CTAG2O75638 210 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 AKR7A3O95154 331 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 ACHEP22303 614 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 FAUP35544 74 aaKnown RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 GRK6P43250 576 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 RPS4XP62701 263 aaKnown RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 FAM74A1Q5RGS3 127 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 NKAIN2Q5VXU1 208 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 B3GNTL1Q67FW5 361 aaPredicted RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 TFAP2EQ6VUC0 442 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 ZNF227Q86WZ6 799 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 PDZD9Q8IXQ8 264 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 PRSS35Q8N3Z0 413 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 FRMD1Q8N878 549 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 OR2G2Q8NGZ5 317 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 SP7Q8TDD2 431 aaPredicted RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 ATOH1Q92858 354 aaPredicted RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 ZNF524Q96C55 264 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 VSTM2LQ96N03 204 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 AMELYQ99218 206 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 DPYSL5Q9BPU6 564 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 CCDC3Q9BQI4 270 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 LMF2Q9BU23 707 aaKnown RBP10.35□□□□□ -0.75
SRP54-213ENST00000556994 MFFQ9GZY8 342 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 EXO5Q9H790 373 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 FAM60AQ9NP50 221 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 HRASLS2Q9NWW9 162 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 STEAP1Q9UHE8 339 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 OR10H1Q9Y4A9 318 aa10.35□□□□□ -0.75
SRP54-213ENST00000556994 SERINC4A6NH21 518 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ELOA3DA6NLF2 546 aaPredicted RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 OR4C45A6NMZ5 311 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 OIP5O43482 229 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 FOXS1O43638 330 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 SDC3O75056 442 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ABHD16AO95870 558 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ITGA5P08648 1049 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CSRP1P21291 193 aaKnown RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 MAPK3P27361 379 aaPredicted RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 POU3F4P49335 361 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 FNTBP49356 437 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 PRPS1P60891 318 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 BTG2P78543 158 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 TFF2Q03403 129 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ZNF141Q15928 474 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ELOA3BQ3SY89 546 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ALG10Q5BKT4 473 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 C17orf107Q6ZR85 190 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 DNM1P46Q6ZS02 220 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 FAM122BQ7Z309 247 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CDH26Q8IXH8 852 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ESX1Q8N693 406 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ELOA3Q8NG57 546 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 BAHD1Q8TBE0 780 aaPredicted RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 KLHDC3Q9BQ90 382 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 MED9Q9NWA0 146 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 GTF2A1LQ9UNN4 478 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 A0A0A6YYC8 382 aaPredicted RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 A0A1B0GTQ1 180 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 NPIPB9F8W1W9 429 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 I3L1I5 382 aaPredicted RBP10.34□□□□□ -0.75
SRP54-213ENST00000556994 CT45A8P0DMV1 189 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CT45A9P0DMV2 189 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CALCRP30988 508 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 RAB38P57729 211 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 C2orf76Q3KRA6 126 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CT45A2Q5DJT8 189 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 ANKRD16Q6P6B7 361 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CBLN3Q6UW01 205 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 LRRN1Q6UXK5 716 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 CDC20BQ86Y33 519 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 YAF2Q8IY57 180 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 BCORP1Q8N888 145 aa10.34□□□□□ -0.75
SRP54-213ENST00000556994 EXD3Q8N9H8 876 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms