RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 C3orf36Q3SXR2 165 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CARD17Q5XLA6 110 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 OR4F15Q8NGB8 312 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 OR6T1Q8NGN1 323 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 OR5J2Q8NH18 312 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 BCL2L2Q92843 193 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SLC41A3Q96GZ6 507 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 C14orf119Q9NWQ9 140 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SLC7A7Q9UM01 511 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 FKBP7Q9Y680 259 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CAPN7Q9Y6W3 813 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 JMJD1CQ15652 2540 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CSPG4Q6UVK1 2322 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 NAV3Q8IVL0 2385 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 HEATR5AQ86XA9 2040 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 IGKV1D-42A0A075B6H8 117 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ARPC4-TTLL3A0A0A6YYG9 625 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 MS4A18H0YCH9 400 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 PLPP3O14495 311 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 NDUFAB1O14561 156 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CH25HO95992 272 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 IGHV4-39P01824 125 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CBR1P16152 277 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 PTNP21246 168 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 LSP1P33241 339 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SF3A3Q12874 501 aaKnown RBP eCLIP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SELPLGQ14242 412 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 LAPTM4AQ15012 233 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CEACAM16Q2WEN9 425 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 MS4A18Q3C1V0 323 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CCDC80Q76M96 950 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 HDDC2Q7Z4H3 204 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ARPINQ7Z6K5 226 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 OR2T12Q8NG77 320 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 C10orf82Q8WW14 230 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 FBXO17Q96EF6 278 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 OR2M2Q96R28 347 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ARHGDIGQ99819 225 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 EMC6Q9BV81 110 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ULBP2Q9BZM5 246 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 POLR2J2Q9GZM3 115 aaKnown RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 POLR2J3Q9H1A7 115 aaKnown RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 DENND2DQ9H6A0 471 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-222ENST00000556768 GPR35Q9HC97 309 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SAR1AQ9NR31 198 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 CA10Q9NS85 328 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 B3GAT1Q9P2W7 334 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 SEC14L4Q9UDX3 406 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF229Q9UJW7 825 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 FBXL3Q9UKT7 428 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 USP22Q9UPT9 525 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 TLN2Q9Y4G6 2542 aa6.39□□□□□ -1.39
SCFD1-222ENST00000556768 NSD1Q96L73 2696 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 IGHV1-18A0A0C4DH31 117 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 A0A1W2PRG6 482 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 B9A039 149 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 C11orf98E9PRG8 122 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 ATP6V1G2-DDX39BF2Z307 99 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 BLOC1S5-TXNDC5H3BN57 136 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 H7C417 338 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 KPNA4O00629 521 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 FBP2O00757 339 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 TRAF3IP2O43734 574 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 TPST2O60704 377 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 FZD7O75084 574 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 GMNNO75496 209 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 FARS2O95363 451 aaKnown RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 RAB36O95755 333 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 BCL10O95999 233 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 IGKV3-15P01624 115 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 BGLAPP02818 100 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 CSF3P09919 207 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 CD79AP11912 226 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 IFNGR1P15260 489 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 PCSK6P29122 969 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 GUCA1AP43080 201 aaPredicted RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 CSNK1A1P48729 337 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 EFNA4P52798 201 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 LGALS3BPQ08380 585 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 SPOCK1Q08629 439 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 NPRL3Q12980 569 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 CAMK2DQ13557 499 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 GALEQ14376 348 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 GSG1Q2KHT4 349 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 RABL3Q5HYI8 236 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 REP15Q6BDI9 236 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 PGM2L1Q6PCE3 622 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 LINC00114Q6XXX2 140 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF813Q6ZN06 617 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 SLC46A3Q7Z3Q1 461 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 PIWIL3Q7Z3Z3 882 aaKnown RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 COMTD1Q86VU5 262 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 C20orf196Q8IYI0 205 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF540Q8NDQ6 660 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 RP9Q8TA86 221 aaKnown RBP6.38□□□□□ -1.39
SCFD1-222ENST00000556768 FAM168AQ92567 244 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 ZNF566Q969W8 418 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 TAMM41Q96BW9 452 aa6.38□□□□□ -1.39
SCFD1-222ENST00000556768 TPD52L3Q96J77 140 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms