RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 IL6P05231 212 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 IDO1P14902 403 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 CDH2P19022 906 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 BGNP21810 368 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 COMPP49747 757 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 SELENOPP49908 381 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 CHN2P52757 468 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 CRISP3P54108 245 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 COPZ1P61923 177 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 NAAAQ02083 359 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 BST1Q10588 318 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 KRT71Q3SY84 523 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 AWAT1Q58HT5 328 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 C1orf140Q5VVS0 124 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 TMEM225Q6GV28 225 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF836Q6ZNA1 936 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF621Q6ZSS3 439 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 LINGO2Q7L985 606 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 OR4F15Q8NGB8 312 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 SLC38A5Q8WUX1 472 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 TRIM63Q969Q1 353 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 AURKBQ96GD4 344 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 MAELQ96JY0 434 aaKnown RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 ALKBH3Q96Q83 286 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 TAPBPLQ9BX59 468 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 C12orf10Q9HB07 376 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 BCL2L10Q9HD36 194 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 SDR39U1Q9NRG7 319 aaPredicted RBP8.64□□□□□ -1.03
SCFD1-220ENST00000556486 SLC6A13Q9NSD5 602 aa8.64□□□□□ -1.03
SCFD1-220ENST00000556486 A0A0A6YYJ9 748 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 A0A0G2JPF8 293 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 TRPC5OSA6NMA1 111 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 HNRNPCL2B2RXH8 293 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 HNRNPCL3B7ZW38 293 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 HNRNPCL1O60812 293 aaKnown RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 STAMBPO95630 424 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 LGI1O95970 557 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 TACSTD2P09758 323 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 OR4A8P0C604 315 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 CECR9P0C854 216 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 GKN3PP0CG01 181 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 HNRNPCL4P0DMR1 293 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 PRG2P13727 222 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 DAOP14920 347 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 IDH3GP51553 393 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 CDH15P55291 814 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 UBE2NP61088 152 aaKnown RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 EGR4Q05215 589 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 LARS2Q15031 903 aaKnown RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 PDCD4Q53EL6 469 aaKnown RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 PRR31Q5SQ13 230 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 CD276Q5ZPR3 534 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 SHQ1Q6PI26 577 aaKnown RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 C5orf46Q6UWT4 87 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 GPAT4Q86UL3 456 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 VRK2Q86Y07 508 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 CCDC36Q8IYA8 594 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 LSMEM1Q8N8F7 131 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF418Q8TF45 676 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 ZBTB18Q99592 522 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 KCNS3Q9BQ31 491 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 PTDSS2Q9BVG9 487 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 MYLK2Q9H1R3 596 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 ARMC7Q9H6L4 198 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 TPT1P8Q9HAU6 139 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 PNPOQ9NVS9 261 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 THAP1Q9NVV9 213 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 ADPRHL2Q9NX46 363 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 B3GAT1Q9P2W7 334 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF443Q9Y2A4 671 aaPredicted RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 IFT52Q9Y366 437 aa8.63□□□□□ -1.03
SCFD1-220ENST00000556486 PRKDCP78527 4128 aaKnown RBP8.63□□□□□ -1.03
SCFD1-220ENST00000556486 A0A0G2JK05 382 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 SH3PXD2BA1X283 911 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 SLCO1B7G3V0H7 640 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 UPK3AO75631 287 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 SLC22A3O75751 556 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 KRT33AO76009 404 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 AHSA1O95433 338 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 PNMTP11086 282 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 ETFAP13804 333 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 CBR1P16152 277 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 EPHA3P29320 983 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 SLC18A1P54219 525 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 DSTNP60981 165 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 HGFACQ04756 655 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 BNIP2Q12982 314 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 ZNF627Q7L945 461 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 CROCCP2Q86T23 111 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 CARM1Q86X55 608 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 CLIP4Q8N3C7 705 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 CADM2Q8N3J6 435 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 ADPRHL1Q8NDY3 354 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 IL17RDQ8NFM7 739 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 PNPT1Q8TCS8 783 aaKnown RBP8.62□□□□□ -1.03
SCFD1-220ENST00000556486 FAM216AQ8WUB2 273 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 ZFAND2BQ8WV99 257 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 NEU4Q8WWR8 484 aaPredicted RBP8.62□□□□□ -1.03
SCFD1-220ENST00000556486 DOK1Q99704 481 aa8.62□□□□□ -1.03
SCFD1-220ENST00000556486 C1QTNF5Q9BXJ0 243 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms