RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 SGPP2Q8IWX5 399 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 UEVLDQ8IX04 471 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 C9orf62Q8N4C0 152 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 MORN4Q8NDC4 146 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR4K15Q8NH41 348 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 ACKR4Q9NPB9 350 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 PRDM7Q9NQW5 492 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 LSM2Q9Y333 95 aaKnown RBP13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 MED6O75586 246 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 GCM2O75603 506 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 RGS11O94810 467 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 ADRB1P08588 477 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 LSM11P83369 360 aaKnown RBP eCLIP13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC22A6Q4U2R8 563 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 ZNF679Q8IYX0 411 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 OR2AK2Q8NG84 335 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 FNDC9Q8TBE3 224 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 C20orf141Q9NUB4 165 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 FBXO24O75426 580 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 FAM209AQ5JX71 171 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 USP53Q70EK8 1073 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 TP53I13Q8NBR0 393 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 C17orf47Q8NEP4 570 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 TSSK2Q96PF2 358 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 NKX6-2Q9C056 277 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 DNTTIP1Q9H147 329 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 CGGBP1Q9UFW8 167 aaPredicted RBP13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 EMC9Q9Y3B6 208 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 RNF215Q9Y6U7 377 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 CTGFP29279 349 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 CMIPQ8IY22 773 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 KNL1Q8NG31 2342 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 MIB2Q96AX9 1013 aa13.78□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC22A23A1A5C7 686 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 TSPAN11A1L157 253 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 SSX5O60225 188 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 TMEM225BP0DP42 221 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 GNRHRP30968 328 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 TDGQ13569 410 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 ARL6IP1Q15041 203 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 ADGRE4PQ86SQ3 457 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 RNF141Q8WVD5 230 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 RHBDD3Q9Y3P4 386 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 SLC22A7Q9Y694 548 aa13.77□□□□□ -0.2
ARHGEF40-207ENST00000556399 E9PI62 339 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 DVL2O14641 736 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 LPLP06858 475 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 TANGO2Q6ICL3 276 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 C3orf33Q6P1S2 294 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 GLDNQ6ZMI3 551 aaPredicted RBP13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 OR13C9Q8NGT0 318 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 TCTEX1D2Q8WW35 142 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 FITM1A5D6W6 292 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 NPIPA2E9PIF3 369 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 NPIPA3F8WFD2 350 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 RAB6AP20340 208 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 RAG2P55895 527 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 SLC25A30Q5SVS4 291 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 RNF170Q96K19 258 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 PIGMQ9H3S5 423 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 SIGLEC7Q9Y286 467 aa13.77□□□□□ -0.21
ARHGEF40-207ENST00000556399 CDC42EP2O14613 210 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 SNRNP70P08621 437 aaKnown RBP13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 BDKRB2P30411 391 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 AKR1C2P52895 323 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 POU3F1Q03052 451 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 AKR1C1Q04828 323 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 EEF1A2Q05639 463 aaKnown RBP13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM215Q68D42 235 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 PAPD4Q6PIY7 484 aaKnown RBP13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 GABRG1Q8N1C3 465 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 TCEAL3Q969E4 200 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 VN1R3Q9BXE9 311 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 SELENOIQ9C0D9 397 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 BLACEA4D250 179 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 NTN1O95631 604 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 SERPINA5P05154 406 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 PTHLHP12272 177 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 RPS27P42677 84 aaKnown RBP13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 MCEMP1Q8IX19 187 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 TMEM156Q8N614 296 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 CLCC1Q96S66 551 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 CD3DP04234 171 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 CXCL3P19876 107 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 FXYD4P59646 89 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 USF2Q15853 346 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 LPCAT3Q6P1A2 487 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 ZNF547Q8IVP9 402 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 CDH26Q8IXH8 852 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 SLC6A17Q9H1V8 727 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 SLC25A32Q9H2D1 315 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 PIAS3Q9Y6X2 628 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 SGCEO43556 437 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 UTS2O95399 124 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 POU3F3P20264 500 aaPredicted RBP13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 RUNX2Q13950 521 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 RSU1Q15404 277 aa13.76□□□□□ -0.21
ARHGEF40-207ENST00000556399 RAB11FIP2Q7L804 512 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms