RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 SLC13A4Q9UKG4 626 aa11.42□□□□□ -0.58
TGFB3-204ENST00000556285 TENM1Q9UKZ4 2725 aa11.42□□□□□ -0.58
TGFB3-204ENST00000556285 CPSF4LA6NMK7 179 aaKnown RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 EVPLLA8MZ36 301 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 M0QX08 132 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 SYNGR3O43761 229 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 SERPINB7O75635 380 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 CH25HO95992 272 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 ERCC1P07992 297 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 CSNK1A1P48729 337 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 ATP4BP51164 291 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 CDH15P55291 814 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 MTPNP58546 118 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 MELKQ14680 651 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 TRMT5Q32P41 509 aaKnown RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 ALKBH6Q3KRA9 238 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 ENTPD8Q5MY95 495 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 AGBL2Q5U5Z8 902 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 LRFN4Q6PJG9 635 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 RANBP3LQ86VV4 465 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 PAQR4Q8N4S7 273 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 LINC01356Q8N9X3 169 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 OR5J2Q8NH18 312 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 VANGL1Q8TAA9 524 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 HPS1Q92902 700 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 TMEM54Q969K7 222 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 YIPF5Q969M3 257 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 TMEFF2Q9UIK5 374 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 FBXO9Q9UK97 447 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-204ENST00000556285 ANGPT4Q9Y264 503 aa11.41□□□□□ -0.58
TGFB3-204ENST00000556285 M0R233 179 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 HAX1O00165 279 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 KPNA4O00629 521 aaPredicted RBP11.4□□□□□ -0.58
TGFB3-204ENST00000556285 ERLIN1O75477 346 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 NCR1O76036 304 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 NAT2P11245 290 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 CCL2P13500 99 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 CD247P20963 164 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 GLRXP35754 106 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 SQLEQ14534 574 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 ZNF74Q16587 644 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 TTMPQ5BVD1 217 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.58
TGFB3-204ENST00000556285 ZNF613Q6PF04 617 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 SLC35D2Q76EJ3 337 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 DHDDSQ86SQ9 333 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 BHLHE22Q8NFJ8 381 aaPredicted RBP11.4□□□□□ -0.58
TGFB3-204ENST00000556285 SH3GL3Q99963 347 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 OR51B6Q9H340 312 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 CORO2BQ9UQ03 480 aa11.4□□□□□ -0.58
TGFB3-204ENST00000556285 FAM157AC9JC47 383 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 CHP2O43745 196 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 RAB36O95755 333 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 CLPTM1O96005 669 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 MT-ATP6P00846 226 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 FAM157BP0CG42 384 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 ITGA2P17301 1181 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 SRP14P37108 136 aaKnown RBP11.39□□□□□ -0.59
TGFB3-204ENST00000556285 EVX1P49640 407 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 CRYBA2P53672 197 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 ERVS71-1P61550 626 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 RUNX1T1Q06455 604 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 CYP51A1Q16850 503 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 GKAP1Q5VSY0 366 aaPredicted RBP11.39□□□□□ -0.59
TGFB3-204ENST00000556285 RINLQ6ZS11 566 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 SLC22A24Q8N4F4 322 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 C11orf65Q8NCR3 313 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 OR6X1Q8NH79 312 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 CLDND2Q8NHS1 167 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 ADAMTS16Q8TE57 1224 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 TAMM41Q96BW9 452 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 TSPAN32Q96QS1 320 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 CGREF1Q99674 301 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 ZNF385DQ9H6B1 395 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 LPAR2Q9HBW0 351 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 GLTPQ9NZD2 209 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 DUSP13Q9UII6 198 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 LEF1Q9UJU2 399 aaPredicted RBP11.39□□□□□ -0.59
TGFB3-204ENST00000556285 SLC7A7Q9UM01 511 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 SPEF1Q9Y4P9 236 aa11.39□□□□□ -0.59
TGFB3-204ENST00000556285 POM121CA8CG34 1229 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 FMO6PO60774 539 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 UBL3O95164 117 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 OR6A2O95222 327 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 SERPINA5P05154 406 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 PGA4P0DJD7 388 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 PGA3P0DJD8 388 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 MAGEB1P43366 347 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 GZMMP51124 257 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 DVL1P1P54792 670 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-204ENST00000556285 MYBPC1Q00872 1141 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 GALK2Q01415 458 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 ZP4Q12836 540 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 TTC33Q6PID6 262 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-204ENST00000556285 PIWIL3Q7Z3Z3 882 aaKnown RBP11.38□□□□□ -0.59
TGFB3-204ENST00000556285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-204ENST00000556285 OR4K5Q8NGD3 323 aa11.38□□□□□ -0.59
TGFB3-204ENST00000556285 GTF3AQ92664 365 aaKnown RBP11.38□□□□□ -0.59
TGFB3-204ENST00000556285 ATP6V1G3Q96LB4 118 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms