RNA–Protein interactions for RNA: ENST00000555985.5

LINC00648-202, long intergenic non-protein coding RNA 648, humanhuman

TSL 2 BASIC

Gene LINC00648, Length 2,885 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-202ENST00000555985 MRPL28Q13084 256 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SKP2Q13309 424 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 FGFBP1Q14512 234 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 DECR1Q16698 335 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 PLPPR5Q32ZL2 321 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 FLYWCH1Q4VC44 716 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 EIPR1Q53HC9 387 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF787Q6DD87 383 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 MTFR2Q6P444 385 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 PLET1Q6UQ28 207 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 MAMDC2Q7Z304 686 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 C6orf120Q7Z4R8 191 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 MARCH3Q86UD3 253 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 CD163Q86VB7 1156 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 RNF130Q86XS8 419 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 HIPK1Q86Z02 1210 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 CCDC36Q8IYA8 594 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 C10orf111Q8N326 155 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 DPP10Q8N608 796 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 FAM86B1Q8N7N1 296 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 NAXEQ8NCW5 288 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 OR5M3Q8NGP4 307 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 OR1J4Q8NGS1 313 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ENKURQ8TC29 256 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 GPR151Q8TDV0 419 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 LINC00052Q96N35 136 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 CHCHD6Q9BRQ6 235 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 DPY30Q9C005 99 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 RACGAP1Q9H0H5 632 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 GORASP2Q9H8Y8 452 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 HHATLQ9HCP6 504 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 IL1RAPQ9NPH3 570 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 UBQLN4Q9NRR5 601 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 MCUBQ9NWR8 336 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 COA4Q9NYJ1 87 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SLAMF8Q9P0V8 285 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 PLEKHB1Q9UF11 243 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 Q9UFV3 132 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 GTF2A1LQ9UNN4 478 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 USP9YO00507 2555 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SETXQ7Z333 2677 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 FREM3P0C091 2139 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 A0A087WZY1 265 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 A0A096LPI6 279 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 A0A0A6YYJ9 748 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 FAM221AA4D161 298 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 EFCAB10A6NFE3 127 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 AHRRA9YTQ3 701 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 LINC00587B1AMM8 73 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 C19orf84I3L1E1 186 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ZG16O60844 167 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 WBP4O75554 376 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SLC22A3O75751 556 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SNAPINO95295 136 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 NPPAP01160 153 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 IFNA7P01567 189 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 CSF3P09919 207 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 IGFBP5P24593 272 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 MSX1P28360 303 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 GRNP28799 593 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 NUP62P37198 522 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 RPL35P42766 123 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 RGS6P49758 472 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 POLR2JP52435 117 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SUCLG1P53597 346 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SUMO3P55854 103 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF117Q03924 483 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 LASP1Q14847 261 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 LARS2Q15031 903 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 GPR68Q15743 365 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 MAPK14Q16539 360 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 COX20Q5RI15 118 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 C1orf185Q5T7R7 199 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 C16orf54Q6UWD8 224 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ENPP6Q6UWR7 440 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 FJX1Q86VR8 437 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 TSPYL5Q86VY4 417 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 CYP4Z1Q86W10 505 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 MISPQ8IVT2 679 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 GTPBP8Q8N3Z3 284 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 DUSP18Q8NEJ0 188 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 OR5D16Q8NGK9 328 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 OR4A15Q8NGL6 344 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 GPR119Q8TDV5 335 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF431Q8TF32 576 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SLC47A1Q96FL8 570 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ZC3HAV1LQ96H79 300 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 COPS4Q9BT78 406 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 SLC38A1Q9H2H9 487 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 OR51I1Q9H343 314 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 METTL7AQ9H8H3 244 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 EXOSC3Q9NQT5 275 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ZCCHC3Q9NUD5 404 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 RDH8Q9NYR8 311 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 KIF17Q9P2E2 1029 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 UBQLN2Q9UHD9 624 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 LEF1Q9UJU2 399 aaPredicted RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 NDRG4Q9ULP0 352 aaKnown RBP3.51□□□□□ -1.85
LINC00648-202ENST00000555985 LIPT1Q9Y234 373 aa3.51□□□□□ -1.85
LINC00648-202ENST00000555985 ZNF469Q96JG9 3925 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms