RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 FABP6P51161 128 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 NAAAQ02083 359 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 FXNQ16595 210 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 LRFN4Q6PJG9 635 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 NRMQ8IXM6 262 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 FAM169BQ8N8A8 192 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 ANKS4BQ8N8V4 417 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 BPIFA2Q96DR5 249 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 C18orf12Q96KH6 178 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 FOXB1Q99853 325 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 SMR3AQ99954 134 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 KATNB1Q9BVA0 655 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 INIPQ9NRY2 104 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 DCAF13Q9NV06 445 aaKnown RBP17.83■□□□□ 0.44
VTI1B-205ENST00000555543 ZNF224Q9NZL3 707 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 GDF2Q9UK05 429 aaPredicted RBP17.83■□□□□ 0.44
VTI1B-205ENST00000555543 RPS6KA6Q9UK32 745 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 POFUT2Q9Y2G5 429 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 ENPP4Q9Y6X5 453 aa17.83■□□□□ 0.44
VTI1B-205ENST00000555543 A0A087WUU8 490 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 H7C1Q1 480 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 IGHV4-39P01824 125 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 HSD17B1P14061 328 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 CAPZA2P47755 286 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 IDH3GP51553 393 aaPredicted RBP17.82■□□□□ 0.44
VTI1B-205ENST00000555543 LAPTM4AQ15012 233 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 C3orf36Q3SXR2 165 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 AGAP6Q5VW22 663 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 ZNF544Q6NX49 715 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 TBPL2Q6SJ96 375 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 FBXL14Q8N1E6 418 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 MUC15Q8N387 334 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 FITM2Q8N6M3 262 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 ASB10Q8WXI3 467 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 TRMT61AQ96FX7 289 aaKnown RBP17.82■□□□□ 0.44
VTI1B-205ENST00000555543 CBLN4Q9NTU7 201 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 B3GNT2Q9NY97 397 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 CD300AQ9UGN4 299 aa17.82■□□□□ 0.44
VTI1B-205ENST00000555543 A0A1W2PRG6 482 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 PAX7P23759 505 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 MSX2P35548 267 aaPredicted RBP17.81■□□□□ 0.44
VTI1B-205ENST00000555543 NPRL3Q12980 569 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 FHL1Q13642 323 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 CCDC36Q8IYA8 594 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 NOXO1Q8NFA2 376 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 ACOT11Q8WXI4 607 aaPredicted RBP17.81■□□□□ 0.44
VTI1B-205ENST00000555543 HTRA1Q92743 480 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 COX4I2Q96KJ9 171 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 C7orf34Q96L11 122 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 ZNF347Q96SE7 839 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 CDRT15Q96T59 188 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 SEPHS2Q99611 448 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 CACNG6Q9BXT2 260 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 MRPL13Q9BYD1 178 aaKnown RBP17.81■□□□□ 0.44
VTI1B-205ENST00000555543 MOV10Q9HCE1 1003 aaKnown RBP17.81■□□□□ 0.44
VTI1B-205ENST00000555543 NDUFAF4Q9P032 175 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 HIF3AQ9Y2N7 669 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 V9GYQ6 96 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 NIPBLQ6KC79 2804 aaeCLIP17.81■□□□□ 0.44
VTI1B-205ENST00000555543 C2CD3Q4AC94 2353 aa17.81■□□□□ 0.44
VTI1B-205ENST00000555543 TRAV27A0A087WT01 109 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 MCIDASD6RGH6 385 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 FAM107AO95990 144 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 IGHG1P01857 330 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 CRYAAP02489 173 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 INHBBP09529 407 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 CD79AP11912 226 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 ARR3P36575 388 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 VLDLRP98155 873 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 MYBPC1Q00872 1141 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 PRKCDQ05655 676 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 HIST3H3Q16695 136 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 SAMD4BQ5PRF9 694 aaKnown RBP17.8■□□□□ 0.44
VTI1B-205ENST00000555543 ARMC4Q5T2S8 1044 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 DEFB107AQ8IZN7 70 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 SYT14Q8NB59 555 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 ZNF75AQ96N20 296 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 KCNS3Q9BQ31 491 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 GORASP2Q9H8Y8 452 aa17.8■□□□□ 0.44
VTI1B-205ENST00000555543 NMNAT1Q9HAN9 279 aaPredicted RBP17.8■□□□□ 0.44
VTI1B-205ENST00000555543 SAMD4AQ9UPU9 718 aaKnown RBP17.8■□□□□ 0.44
VTI1B-205ENST00000555543 IGHV2OR16-5A0A0B4J2B6 119 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 hCG_2039718K7EN88 272 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 ARPC2O15144 300 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 DHHO43323 396 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 TRMUO75648 421 aaKnown RBP17.79■□□□□ 0.44
VTI1B-205ENST00000555543 DIRAS1O95057 198 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 QDPRP09417 244 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 SAGP10523 405 aaPredicted RBP17.79■□□□□ 0.44
VTI1B-205ENST00000555543 GPR4P46093 362 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 DAP3P51398 398 aaKnown RBP17.79■□□□□ 0.44
VTI1B-205ENST00000555543 CLRN1P58418 232 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 CBX1P83916 185 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 HGFACQ04756 655 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 PIGFQ07326 219 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 GSG1Q2KHT4 349 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 IQCCQ4KMZ1 466 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 ALG10Q5BKT4 473 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 ZNF730Q6ZMV8 503 aa17.79■□□□□ 0.44
VTI1B-205ENST00000555543 MBOAT2Q6ZWT7 520 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms